diff --git a/docs/images/sarek_subway.png b/docs/images/sarek_subway.png index b13048a1ba..90df3b998d 100644 Binary files a/docs/images/sarek_subway.png and b/docs/images/sarek_subway.png differ diff --git a/docs/images/sarek_subway.svg b/docs/images/sarek_subway.svg index e097e63a60..764824206a 100644 --- a/docs/images/sarek_subway.svg +++ b/docs/images/sarek_subway.svg @@ -40,15 +40,15 @@ inkscape:pagecheckerboard="false" inkscape:document-units="mm" showgrid="true" - inkscape:zoom="1.4142136" - inkscape:cx="426.73893" - inkscape:cy="288.14601" + inkscape:zoom="0.7071068" + inkscape:cx="607.40471" + inkscape:cy="370.8421" inkscape:window-width="1918" inkscape:window-height="1006" inkscape:window-x="0" inkscape:window-y="0" inkscape:window-maximized="0" - inkscape:current-layer="g2380" + inkscape:current-layer="layer4" width="211mm" fit-margin-top="0" fit-margin-left="0" @@ -1972,11 +1972,11 @@ id="text3914-5" y="-424.35065" x="106.36658" - style="font-style:normal;font-variant:normal;font-weight:normal;font-stretch:normal;font-size:12.5001px;line-height:1.25;font-family:'Maven Pro';-inkscape-font-specification:'Maven Pro, @wght=900';font-variant-ligatures:normal;font-variant-caps:normal;font-variant-numeric:normal;font-variant-east-asian:normal;font-variation-settings:'wght' 900;display:inline;fill:#000000;fill-opacity:1;stroke:none;stroke-width:0.937508" + style="font-style:normal;font-variant:normal;font-weight:bold;font-stretch:normal;font-size:12.5001px;line-height:1.25;font-family:sans-serif;-inkscape-font-specification:'sans-serif Bold';font-variant-ligatures:normal;font-variant-caps:normal;font-variant-numeric:normal;font-variant-east-asian:normal;font-variation-settings:'wght' 900;display:inline;fill:#000000;fill-opacity:1;stroke:none;stroke-width:0.937508;" xml:space="preserve" inkscape:transform-center-x="6.7420994" inkscape:transform-center-y="5.0565745">variant calling: Based on GATK4 Best Practices + Preprocessing + snpeff, vep + Annotation + style="font-style:normal;font-variant:normal;font-weight:bold;font-stretch:normal;font-size:12.2757px;font-family:'Maven Pro';-inkscape-font-specification:'Maven Pro Bold';font-variant-ligatures:normal;font-variant-caps:normal;font-variant-numeric:normal;font-variant-east-asian:normal;font-variation-settings:'wght' 700">Annotation + @@ -3137,6 +3144,7 @@ transform="matrix(2.769692,0,0,-2.769692,998.93074,1587.2949)">Reports + GermlineGermlinedeepvariant, freebayesdeepvariant, freebayes haplotypecaller, haplotypecaller, mpileup, strelka2 mpileup, strelka2• manta, tiddit• manta, tiddit• cnvkit + style="font-style:normal;font-variant:normal;font-weight:normal;font-stretch:normal;font-size:20px;line-height:1.25;font-family:'Maven Pro';-inkscape-font-specification:'Maven Pro, Normal';font-variant-ligatures:normal;font-variant-caps:normal;font-variant-numeric:normal;font-variant-east-asian:normal;stroke-width:1px" + id="tspan23782">• cnvkit + Variant Calling + style="font-style:normal;font-variant:normal;font-weight:bold;font-stretch:normal;font-size:34px;line-height:1.25;font-family:'Maven Pro';-inkscape-font-specification:'Maven Pro, Bold';font-variant-ligatures:normal;font-variant-caps:normal;font-variant-numeric:normal;font-variant-east-asian:normal;stroke-width:1px" + id="tspan23744">Variant Calling + SomaticSomaticfreebayes, mutect2, freebayes, mutect2, strelka2 strelka2• manta, tiddit• manta, tiddit• ascat, cnvkit,• ascat, cnvkit, controlfreec controlfreec• msisensorpro + style="font-style:normal;font-variant:normal;font-weight:normal;font-stretch:normal;font-size:20px;line-height:1.25;font-family:'Maven Pro';-inkscape-font-specification:'Maven Pro, Normal';font-variant-ligatures:normal;font-variant-caps:normal;font-variant-numeric:normal;font-variant-east-asian:normal;stroke-width:1px" + id="tspan23826">• msisensorpro +