diff --git a/docs/images/sarek_workflow.png b/docs/images/sarek_workflow.png index f3da610db4..969d7645ca 100644 Binary files a/docs/images/sarek_workflow.png and b/docs/images/sarek_workflow.png differ diff --git a/docs/images/sarek_workflow.svg b/docs/images/sarek_workflow.svg index 0622d1c2b5..6647299942 100644 --- a/docs/images/sarek_workflow.svg +++ b/docs/images/sarek_workflow.svg @@ -2214,14 +2214,14 @@ inkscape:pageopacity="0" inkscape:pageshadow="2" inkscape:window-width="1920" - inkscape:window-height="1012" + inkscape:window-height="1015" id="namedview4" showgrid="false" inkscape:zoom="0.5" - inkscape:cx="445.80738" - inkscape:cy="751.19913" - inkscape:window-x="1920" - inkscape:window-y="759" + inkscape:cx="698.36328" + inkscape:cy="722.78928" + inkscape:window-x="0" + inkscape:window-y="0" inkscape:window-maximized="1" inkscape:current-layer="g10" units="mm" @@ -2272,6 +2272,7 @@ + @@ -2810,6 +2811,7 @@ + Based on GATK Best PracticesPreprocessing + style="fill:#ffffff" />Based on GATK Best PracticesPreprocessing + @@ -3178,73 +3184,7 @@ -• GATK HaplotypeCaller mpileup, Strelka2• Manta, TIDDITVariant Calling• GATK Mutect2 FreeBayes, Strelka2• Manta• ASCAT, Control-FREECsnpEff, VEPsnpEff, VEPAnnotation + style="font-size:20.2700367px;line-height:1.25">snpEff, VEPsnpEff, VEPAnnotation + + @@ -3301,26 +3245,6 @@ -Reports @@ -3333,78 +3257,170 @@ Reports +• GATK HaplotypeCaller mpileup, Strelka2• Manta, TIDDITVariant Calling• GATK Mutect2 FreeBayes, Strelka2• Manta• ASCAT, Control-FREEC•MSIsensor2.5.22.6