diff --git a/modules.json b/modules.json index 82b24aee..ca18543b 100644 --- a/modules.json +++ b/modules.json @@ -7,7 +7,7 @@ "nf-core": { "custom/dumpsoftwareversions": { "branch": "master", - "git_sha": "911696ea0b62df80e900ef244d7867d177971f73", + "git_sha": "05c280924b6c768d484c7c443dad5e605c4ff4b4", "installed_by": ["modules"] }, "gfaffix": { @@ -77,7 +77,7 @@ }, "smoothxg": { "branch": "master", - "git_sha": "911696ea0b62df80e900ef244d7867d177971f73", + "git_sha": "d7c40cb04c94c408608ceabfdc14a443915a87fe", "installed_by": ["modules"] }, "tabix/bgzip": { diff --git a/modules/nf-core/custom/dumpsoftwareversions/main.nf b/modules/nf-core/custom/dumpsoftwareversions/main.nf index ebc87273..c9d014b1 100644 --- a/modules/nf-core/custom/dumpsoftwareversions/main.nf +++ b/modules/nf-core/custom/dumpsoftwareversions/main.nf @@ -2,10 +2,10 @@ process CUSTOM_DUMPSOFTWAREVERSIONS { label 'process_single' // Requires `pyyaml` which does not have a dedicated container but is in the MultiQC container - conda "bioconda::multiqc=1.14" + conda "bioconda::multiqc=1.15" container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? - 'https://depot.galaxyproject.org/singularity/multiqc:1.14--pyhdfd78af_0' : - 'biocontainers/multiqc:1.14--pyhdfd78af_0' }" + 'https://depot.galaxyproject.org/singularity/multiqc:1.15--pyhdfd78af_0' : + 'biocontainers/multiqc:1.15--pyhdfd78af_0' }" input: path versions diff --git a/modules/nf-core/smoothxg/main.nf b/modules/nf-core/smoothxg/main.nf index 8e95bd1d..0d10a4a4 100644 --- a/modules/nf-core/smoothxg/main.nf +++ b/modules/nf-core/smoothxg/main.nf @@ -2,10 +2,10 @@ process SMOOTHXG { tag "$meta.id" label 'process_high' - conda "bioconda::smoothxg=0.7.0" + conda "bioconda::smoothxg=0.7.1" container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? - 'https://depot.galaxyproject.org/singularity/smoothxg:0.7.0--hfb1f815_0' : - 'biocontainers/smoothxg:0.7.0--hfb1f815_0' }" + 'https://depot.galaxyproject.org/singularity/smoothxg:0.7.1--h40c17d1_0' : + 'biocontainers/smoothxg:0.7.1--h40c17d1_0' }" input: tuple val(meta), path(gfa)