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Addition of SILVA Release 138.2

enhancementNew feature or requestNew feature or request

Status: Open.

#791 In nf-core/ampliseq;

· d4straub opened on Nov 5, 2024

standardize the samplesheet for ampliseq to the other nf-core pipelines

enhancementNew feature or requestNew feature or request

Status: Open.

#790 In nf-core/ampliseq;

· jenmuell opened on Oct 29, 2024

Improving phylogenetic placement

enhancementNew feature or requestNew feature or request

Status: Open.

#787 In nf-core/ampliseq;

· danilodileo opened on Oct 28, 2024

GSR-DB

enhancementNew feature or requestNew feature or request

Status: Open.

#779 In nf-core/ampliseq;

· dbu008 opened on Oct 3, 2024

Inconsistent taxonomic assignments with EPA-NG

Status: Open.

#776 In nf-core/ampliseq;

· VeronicRojo opened on Sep 16, 2024

phred score mis-detection by dada2

bugSomething isn't workingSomething isn't working

Status: Open.

#773 In nf-core/ampliseq;

· amakunin opened on Aug 22, 2024

New (10.0) version of Unite databases available to --dada_ref_taxonomy

enhancementNew feature or requestNew feature or request

Status: Open.

#768 In nf-core/ampliseq;

· erikrikarddaniel opened on Jul 25, 2024

Add MACSE to enable frame-shift detection for COI

enhancementNew feature or requestNew feature or request

Status: Open.

#758 In nf-core/ampliseq;

· hjarnek opened on Jul 2, 2024

Adding ONT read support for ampliseq

enhancementNew feature or requestNew feature or request

Status: Open.

#741 In nf-core/ampliseq;

· ShareiFae opened on May 13, 2024

Accessing 16S gene identifiers

enhancementNew feature or requestNew feature or request

Status: Open.

#734 In nf-core/ampliseq;

· annotatebio opened on Apr 12, 2024

12S taxonomic classification databases

enhancementNew feature or requestNew feature or request

Status: Open.

#707 In nf-core/ampliseq;

· emmastrand opened on Feb 28, 2024

Allow to analyse 454 sequencing data

enhancementNew feature or requestNew feature or request

Status: Open.

#669 In nf-core/ampliseq;

· d4straub opened on Dec 1, 2023