From 910e60beb7f2f7a0bb8f00ca69400740249b04bf Mon Sep 17 00:00:00 2001
From: Jennifer Chang <jchang3@fredhutch.org>
Date: Wed, 29 Mar 2023 14:10:27 -0700
Subject: [PATCH] fix: avoid single char variable names and be consistent with
 _get_all_sources

Co-authored-by: Thomas Sibley <tom@zulutango.org>
---
 ingest/workflow/snakemake_rules/fetch_sequences.smk | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/ingest/workflow/snakemake_rules/fetch_sequences.smk b/ingest/workflow/snakemake_rules/fetch_sequences.smk
index 9c7636f9..7332b541 100644
--- a/ingest/workflow/snakemake_rules/fetch_sequences.smk
+++ b/ingest/workflow/snakemake_rules/fetch_sequences.smk
@@ -13,7 +13,7 @@ Produces final output as
 
 """
 
-def download_serotype(w):
+def download_serotype(wildcards):
     serotype = {
         'all': '12637',
         'denv1': '11053',
@@ -21,7 +21,7 @@ def download_serotype(w):
         'denv3': '11069',
         'denv4': '11070'
     }
-    return serotype[w.serotype]
+    return serotype[wildcards.serotype]
 
 rule fetch_from_genbank:
     output: