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Lab organisational profiles online
Nathan Skene edited this page Nov 4, 2023
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We have a:
- github repo
- docker hub repository
- Shinyapps.io - we have a lab account, ask Nathan for password etc
Please use these repositories for lab related work.
- Home
- Useful Info
- To do list for new starters
- Recommended Reading
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Computing
- Our Private Cloud System
- Cloud Computing
- Docker
- Creating a Bioconductor package
- PBS example scripts for the Imperial HPC
- HPC Issues list
- Nextflow
- Analysing TIP-seq data with the nf-core/cutandrun pipeline
- Shared tools on Imperial HPC
- VSCode
- Working with Google Cloud Platform
- Retrieving raw sequence data from the SRA
- Submitting read data to the European Nucleotide Archive
- R markdown
- Lab software
- Genetics
- Reproducibility
- The Lab Website
- Experimental
- Lab resources
- Administrative stuff