Install with pip on command line: pip install -e .

Run GraphMiner tool: GraphMiner -i _inputfile_

Other features:

-mtc/--MultipleTestCorr {bonferroni, fdr_bh, holm} - default = fdr_bh

-o/--outputfolder [str] - default = 'GraphMinerResults'

-size/--moleculesize [int] - default = 60

-sep/--separatorCSVfile [str] - default = ','

-time/--TimeOutTimer [int] - default = 30

-pval/--PValue [float] - default = 0.05

-dend/--CutOffDendrogram [float] - default = 1.5