A Generative Pre-Trained Transformer Package for Pangenomes

This is the standalone version of the EviAnn pipeline

eukaryotic annotation pipeline

Only The Best (Genome Assembly Tools)

A CLI that writes your git commit messages for you with AI

FAIRsFAIR Research Data Object Assessment Service

Fair Formatted Reference Genome Standard

Find, circularise and annotate mitogenome from PacBio assemblies

Foreign Contamination Screening caller scripts and documentation

A Nextflow pipeline for Antimicrobial Resistatnce exploration in metagenomic samples

A file converter and validator for the FHR header and its serializations.

Detect non-inclusive language in your source code.

Mathematical Programming tool for inferring node values in perturbed biological pathways.

Vitis In-Depth Tutorials

Statistical Assignment Package

GitHub Pull Request Auto-Merge Bot

Hifiasm: a haplotype-resolved assembler for accurate Hifi reads

A nextflow pipeline for polishing CLR assemblies

Large genome reassembly based on Hi-C data, continuation of GRAAL

Distant Reader, a tool for using & understanding a corpus

A CLI to create Hyperspike Clusters from Scratch

A package for quantifying transposable elements at a locus level for RNAseq datasets.

Deploy to an Azure PostgreSQL database using PLSQL scripts.

Cross-platform client for PostgreSQL databases

A collection of modules to simplify writing bash scripts.

Core microbiome

FASTA/FASTQ pre-processing programs