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LearnerClassifLDA.R
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LearnerClassifLDA.R
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#' @title Linear Discriminant Analysis Classification Learner
#'
#' @name mlr_learners_classif.lda
#'
#' @description
#' Linear discriminant analysis.
#' Calls [MASS::lda()] from package \CRANpkg{MASS}.
#'
#' @details
#' Parameters `method` and `prior` exist for training and prediction but
#' accept different values for each. Therefore, arguments for
#' the predict stage have been renamed to `predict.method` and `predict.prior`,
#' respectively.
#'
#' @templateVar id classif.lda
#' @template learner
#'
#' @references
#' `r format_bib("venables_2002")`
#'
#' @export
#' @template seealso_learner
#' @template example
LearnerClassifLDA = R6Class("LearnerClassifLDA",
inherit = LearnerClassif,
public = list(
#' @description
#' Creates a new instance of this [R6][R6::R6Class] class.
initialize = function() {
ps = ps(
dimen = p_uty(tags = "predict"),
method = p_fct(c("moment", "mle", "mve", "t"), default = "moment", tags = "train"),
nu = p_int(tags = "train", depends = quote(method == "t")),
predict.method = p_fct(c("plug-in", "predictive", "debiased"), default = "plug-in", tags = "predict"),
predict.prior = p_uty(tags = "predict"),
prior = p_uty(tags = "train"),
tol = p_dbl(tags = "train")
)
super$initialize(
id = "classif.lda",
param_set = ps,
predict_types = c("response", "prob"),
feature_types = c("logical", "integer", "numeric", "factor", "ordered"),
properties = c("weights", "twoclass", "multiclass"),
packages = c("mlr3learners", "MASS"),
label = "Linear Discriminant Analysis",
man = "mlr3learners::mlr_learners_classif.lda"
)
}
),
private = list(
.train = function(task) {
pv = self$param_set$get_values(tags = "train")
formula = task$formula()
invoke(MASS::lda, formula, data = task$data(), .args = pv)
},
.predict = function(task) {
pv = self$param_set$get_values(tags = "predict")
pv = rename(pv, c("predict.method", "predict.prior"), c("method", "prior"))
newdata = ordered_features(task, self)
p = invoke(predict, self$model, newdata = newdata, .args = pv)
if (self$predict_type == "response") {
list(response = p[["class"]])
} else {
list(response = p[["class"]], prob = p[["posterior"]])
}
}
)
)
#' @include aaa.R
learners[["classif.lda"]] = LearnerClassifLDA