Remove git2 dependency

[patrickjcasey]

Overview

This PR is split into 5 different commits to make it easier to review and revert, if there is a problem in the future. The commits are as follows:

1. replace git2-based fetch implementation with gix-based implementation
2. replace git2-based clone implementation with gix-based implementation
3. replace git2-based checkout implementation with gix-based implementation
4. remove git2 dependency and remaining git2 code (logging shim, rustls transport shim...)
5. integrate gix functionality with user facing output, so progress is visible to user

Benefits

• removed git2 and openssl dependencies
• standardized on gix for git operations, as it is already in use with mitre/git plugin
• considerable build time reduction (30% less time for debug build, 20% faster release builds)
• enhanced git UI output to be more informative
• faster hc check when a git clone is needed (~5% faster mitre/hipcheck, ~8% faster serde-rs/serde)

Comparison of User Facing Output

main git clone

remove-git2-dependency git clone

Build Timings

Note: All benchmarks were performed on an Ubuntu 24.04 machine with 8 CPUs and 32 GB of RAM

cargo build --workspace

Benchmark Command

cd /tmp && \
hyperfine --runs 2 \
    --prepare 'cd ~/workspace/hipcheck/main && cargo clean' \
    'cd ~/workspace/hipcheck/main && RUSTC_WRAPPER="" cargo build --workspace'  \
    --prepare 'cd ~/workspace/hipcheck/patrickjcasey/remove-git2-dependency && cargo clean' \
    'cd ~/workspace/hipcheck/patrickjcasey/remove-git2-dependency  &&  RUSTC_WRAPPER="" cargo build --workspace'

Results

cargo build --workspace --release

Benchmark Command

cd /tmp && \
hyperfine --runs 1 \
    --prepare 'cd ~/workspace/hipcheck/main && cargo clean' \
    'cd ~/workspace/hipcheck/main && RUSTC_WRAPPER="" cargo build --workspace --release'  \
    --prepare 'cd ~/workspace/hipcheck/patrickjcasey/remove-git2-dependency && cargo clean' \
    'cd ~/workspace/hipcheck/patrickjcasey/remove-git2-dependency  &&  RUSTC_WRAPPER="" cargo build --workspace --release'

Results

Cold Repo Analysis Benchmark

mitre/hipcheck cold start

testing a repo with ~700 commits

benchmark command

hyperfine --runs 3 \
    --prepare 'rm -rf ~/.cache/hipcheck/clones/github/mitre && cd ~/workspace/hipcheck/main' \
    './target/release/hc check --policy ./config/local.release.Hipcheck.kdl https://github.com/mitre/hipcheck'  \
    --prepare 'rm -rf ~/.cache/hipcheck/clones/github/mitre && cd ~/workspace/hipcheck/patrickjcasey/remove-git2-dependency ' \
    './target/release/hc check --policy ./config/local.release.Hipcheck.kdl https://github.com/mitre/hipcheck'

benchmark result

serde-rs/serde cold start

testing a repo with ~4000 commits

benchmark command

hyperfine --runs 3 \
    --prepare 'rm -rf ~/.cache/hipcheck/clones/github/serde-rs/serde&& cd ~/workspace/hipcheck/main' \
    './target/release/hc check --policy ./config/local.release.Hipcheck.kdl https://github.com/serde-rs/serde'  \
    --prepare 'rm -rf ~/.cache/hipcheck/clones/github/serde-rs/serde && cd ~/workspace/hipcheck/patrickjcasey/remove-git2-dependency ' \
    './target/release/hc check --policy ./config/local.release.Hipcheck.kdl https://github.com/serde-rs/serde'

benchmark result

numpy/numpy cold start

testing a repo with ~38000 commits

benchmark command

hyperfine --runs 3 \
    --prepare 'rm -rf ~/.cache/hipcheck/clones/github/numpy/numpy && cd ~/workspace/hipcheck/main' \
    './target/release/hc check --policy ./config/local.release.Hipcheck.kdl https://github.com/numpy/numpy'  \
    --prepare 'rm -rf ~/.cache/hipcheck/clones/github/numpy/numpy && cd ~/workspace/hipcheck/patrickjcasey/remove-git2-dependency ' \
    './target/release/hc check --policy ./config/local.release.Hipcheck.kdl https://github.com/numpy/numpy'

benchmark result

Manual testing performed

Since this change impacts the way repos are retrieved and/or updated, I performed the following manual tests to verify the new implementation is working correctly:

hc run requiring a clone

rm -rf ~/.cache/hipcheck/clones/github/rustls/rustls
./target/debug/hc check --policy ./config/local.Hipcheck.kdl https://github.com/rustls/rustls
# manually checked commit in  ~/.cache/hipcheck/clones/github/rustls/rustls matches commit hash of tip of main

hc run with existing repo, fetch & pull needed

cd  ~/.cache/hipcheck/clones/github/rustls/rustls
git reset --hard HEAD~10
./target/debug/hc check --policy ./config/local.Hipcheck.kdl https://github.com/rustls/rustls
# manually checked commit in  ~/.cache/hipcheck/clones/github/rustls/rustls matches commit hash of tip of main

Test PyPI Package without version

rm -rf ~/.cache/hipcheck/clones/github/tqdm
./target/debug/hc check --policy ./config/local.Hipcheck.kdl -t pypi tqdm
# manually checked commit in  ~/.cache/hipcheck/clones/github/tqdm/tqdm matches commit hash of latest version tag on github (4.67.1)

Test PyPI package with version

rm -rf ~/.cache/hipcheck/clones/github/tqdm
./target/debug/hc check --policy ./config/local.Hipcheck.kdl -t pypi tqdm@4.50.0
# manually checked commit in  ~/.cache/hipcheck/clones/github/tqdm/tqdm matches commit hash of 4.50.0 tag on github

Test NPM Package without version

rm -rf ~/.cache/hipcheck/clones/github/tqdm
./target/debug/hc check --policy ./config/local.Hipcheck.kdl -t npm express
# manually checked commit in  ~/.cache/hipcheck/clones/github/expressjs/express matches commit hash of latest version tag on github (5.0.1)

Test NPM Package without version

rm -rf ~/.cache/hipcheck/clones/github/tqdm
./target/debug/hc check --policy ./config/local.Hipcheck.kdl -t npm express@4.21.0
# manually checked commit in  ~/.cache/hipcheck/clones/github/expressjs/express matches commit hash of 4.21.0 tag on github

[alilleybrinker]

Updated title and removed WIP from it since it's already marked as a draft and thus can't be accidentally merged, even by myself or Julian.

[j-lanson]

Great work on this Patrick. I'm getting:

failed to clone remote repository
                    An IO error occurred when talking to the server

do you remember if there were any steps you needed to take to get gix to work with MITRE certs?

[j-lanson]

I'm wondering if we don't have to do something like hipcheck/util/http/agent.rs

[j-lanson]

Talking with @alilleybrinker , we feel that the issue is Gix is not picking up native cert store, and is using webpki instead. We need to figure out how to do that without re-introducing openssl

[patrickjcasey]

Waiting for a response from the gitoxide project on the proper way of configuring the use of the system's certificates

[alilleybrinker]

Update: discussed during team sync today. Will continue waiting on guidance from the gitoxide folks rather than trying to maintain a patched fork with the support for certificate changes we need.