tutorial-plain-libraries.md

layout	category	title	is-detailed
page	walkthrough	Libraries tutorial	false

Table of Contents

1. Logging In
2. Propagating samples to libraries
3. Receiving Libraries
4. Adding Library QCs
5. Scanning libraries into your outbox
6. Propagating libraries to library aliquots
7. Creating pool orders
8. Creating Pools
9. Ordering sequencing
10. Troubleshooting

Print the worksheet for this section here: Libraries Worksheet.

{% include logging_in.md detailed=page.is-detailed %}

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2. Propagating samples to libraries

A library is made from one sample for a single target platform and has a specific design associated with it that decides the selection and strategies used to make the library. A library may also have indices (primers/sequencing barcodes/molecular IDs) and QC information.

2.0 Scan samples into your inbox

First, we accept the samples made by the samples team and put them into your inbox.

{% include inboxes.md %}

{% include libraries-from-samples.md detailed=page.is-detailed %}

{% include libraries-receipt.md detailed=page.is-detailed section=3 platform=site.platform_type type=site.library_type %}

3.2 Receipt Transfers

{% include receipt-transfer.md detailed=page.is-detailed items_exercise="3.1" type="library" type_plural="libraries" %}

{% include libraries-qc.md %}

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5. Scanning libraries into your outbox

{% include outboxes.md %}

{% include libraries-to-library-aliquots.md detailed=page.is-detailed %}

{% include libraries-pool-orders.md detailed=page.is-detailed %}

{% include libraries-library-aliquots-to-pools.md detailed=page.is-detailed %}

{% include libraries-orders.md %}

{% include libraries-trouble.md %}

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