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LICENSE
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IMPORTANT: This tool is not a medical device and for research use only!
Do NOT use this tool for diagnosis, prognosis, monitoring or any other
purposes in clinical use.
This script is provided under the revised BSD (3-clause) license
Copyright (c) 2016-2020, Institute for Stroke and Dementia Research, Munich,
Germany, http://www.isd-muc.de
Copyright (c) 2020, MIAC AG Basel, Switzerland, https://miac.swiss
All rights reserved.
Redistribution and use in source and binary forms, with or without
modification, are permitted provided that the following conditions are met:
1. Redistributions of source code must retain the above copyright notice, this
list of conditions and the following disclaimer.
2. Redistributions in binary form must reproduce the above copyright notice,
this list of conditions and the following disclaimer in the documentation
and/or other materials provided with the distribution.
3. Neither the name of the copyright holder nor the names of its
contributors may be used to endorse or promote products derived from
this software without specific prior written permission.
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
The use of the software needs to be acknowledged through proper citations:
For the PSMD pipeline:
Baykara E, Gesierich B, Adam R, Tuladhar AM, Biesbroek JM, Koek HL, Ropele S,
Jouvent E, Alzheimer’s Disease Neuroimaging Initiative (ADNI), Chabriat H,
Ertl-Wagner B, Ewers M, Schmidt R, de Leeuw FE, Biessels GJ, Dichgans M, Duering M
A novel imaging marker for small vessel disease based on skeletonization of
white matter tracts and diffusion histograms
Annals of Neurology 2016, 80(4):581-92, DOI: 10.1002/ana.24758
For FSL-TBSS:
Follow the guidelines at http://fsl.fmrib.ox.ac.uk/fsl/fslwiki/TBSS