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@miRTop

mirTOP

miRNA transcriptome open project

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  1. mirtop mirtop Public

    command lines tool to annotate miRNAs with a standard mirna/isomir naming

    Python 17 24

  2. mirGFF3 mirGFF3 Public

    GFF3 format with miRNA and isomiR information from sequencing data

    14 6

  3. mirgff3_shiny mirgff3_shiny Public

    a Rshiny tool to visualize mirgff3 files

    R 1

  4. simulator simulator Public

    first ideas and brainstorming for small RNA simulator

    C++

Repositories

Showing 10 of 10 repositories
  • mirtop Public

    command lines tool to annotate miRNAs with a standard mirna/isomir naming

    miRTop/mirtop’s past year of commit activity
    Python 17 MIT 24 35 (16 issues need help) 1 Updated Nov 8, 2024
  • miRTOP.github.io Public

    project for small RNA standard annotations

    miRTop/miRTOP.github.io’s past year of commit activity
    HTML 3 MIT 2 5 (1 issue needs help) 1 Updated Apr 11, 2022
  • academic-kickstart Public template Forked from HugoBlox/theme-academic-cv

    đź“ť Easily create a beautiful website using Academic, Hugo, and Netlify

    miRTop/academic-kickstart’s past year of commit activity
    Shell 0 MIT 6,374 0 1 Updated Oct 18, 2019
  • isomir_accuracy_meta_analysis Public

    meta-analysis of public dataset to measure isomiR accuracy

    miRTop/isomir_accuracy_meta_analysis’s past year of commit activity
    R 0 0 0 0 Updated Sep 24, 2019
  • simulator-analysis Public

    code to analyze the simulator data

    miRTop/simulator-analysis’s past year of commit activity
    R 0 0 1 0 Updated Sep 13, 2019
  • smadann Public

    nextflow pipeline to guess and trimmed samples

    miRTop/smadann’s past year of commit activity
    Nextflow 0 0 0 0 Updated Aug 22, 2019
  • mirGFF3 Public

    GFF3 format with miRNA and isomiR information from sequencing data

    miRTop/mirGFF3’s past year of commit activity
    14 6 8 (3 issues need help) 0 Updated Aug 5, 2019
  • mirgff3_shiny Public

    a Rshiny tool to visualize mirgff3 files

    miRTop/mirgff3_shiny’s past year of commit activity
    R 0 MIT 1 17 0 Updated Jun 12, 2019
  • incubator Public

    Where all ideas and discussions happen to lead to new repositories

    miRTop/incubator’s past year of commit activity
    R 4 4 23 1 Updated Apr 25, 2019
  • simulator Public

    first ideas and brainstorming for small RNA simulator

    miRTop/simulator’s past year of commit activity
    C++ 0 0 0 0 Updated Nov 11, 2018

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