Pinned Loading

1. RNAseq_analysis RNAseq_analysis Public

   Exercise of RNAseq alignment against reference, creation of bam, bigwig, RPKM calculation and samples comparison

   Jupyter Notebook

2. PCA_SVM PCA_SVM Public

   PCA and faces recognition using SVM

   Jupyter Notebook

3. Genomic_Data_Analysis Genomic_Data_Analysis Public

   My biggest bioinformatic venture yet. This is an integrated bottom-up analysis of Genomic data, simulating a real bioinformatic pipeline starting from raw transcriptome sequencing data. Three progr…

   2

4. random_forest_hyperparameters_tunning random_forest_hyperparameters_tunning Public

   In this work I use Random Forest tool on two datasets and find the optimal hyperparameters for the algorithm on both datasets and compare their performance.

   Python

5. Neural_Networks Neural_Networks Public

   This work performs two different types of Neural Networks training and 5-fold CV, each one on three datasets that differ in three of the attributes. It uses 100 iterations with random seeds and aft…

   Shell

6. Methylome_Data_Wrangling Methylome_Data_Wrangling Public

   Exercise on Data Wrangling using dplyr and tibble libraries of R

   R