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add summary of whatshap splitting metrics

RNA-seq

Status: Open.

Feature

#1091 In maxplanck-ie/snakepipes;

· katsikora opened on Jan 28, 2025

three-prime-seq replace "shell" with "script" directive

bug

RNA-seq

Status: Open.

#1078 In maxplanck-ie/snakepipes;

· katsikora opened on Nov 8, 2024

Error in mRNA-seq allelic-mapping when using custom genome

allelic

bug

RNA-seq

Status: Open.

#1009 In maxplanck-ie/snakepipes;

· caballero opened on Apr 15, 2024

add support for custom model formula to mRNAseq and other workflows

ATAC-seq

ChIP-Seq

enhancement

RNA-seq

WGBS

Status: Open.

#988 In maxplanck-ie/snakepipes;

· katsikora opened on Feb 20, 2024

make splitSampleSheet more flexible and include any column between name and condition

enhancement

RNA-seq

Status: Open.

#955 In maxplanck-ie/snakepipes;

· katsikora opened on Nov 10, 2023

enable spikein GTFs for mRNA-seq featureCounts

enhancement

RNA-seq

Status: Open.

#858 In maxplanck-ie/snakepipes;

· dkoppstein opened on Oct 18, 2022