Virtual Interaction Predictor for Enzyme Reactions (VIPER)

Web Server: https://viperwebserver.com Model Weights: https://zenodo.org/records/12151573

Local usage

If you want to use VIPER on more than 100 records at a time you can use the scripts/VIPER_run.py script. Todo so create a new CSV file in scripts/ with the column: sequence for the protein amino acid sequence, and the column: smiles for the molecule SMILES string. Then run:

python scripts/VIPER_run --input input_csv_file.csv --output out.csv