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dynamAedes 2.2.9

  • Substitutes legend.pos with legend.position in vignettes.

dynamAedes 2.2.8

  • Adds reference file for life history traits AedeslifeHistoryList.
  • Adds function spreader.
  • Adds vignettes 4 (Uncompressed output) and 5 (spreader).
  • Fixes minor issues in adci.
  • Fixes summary print for punctual and local scale.

dynamAedes 2.2.7

  • Adapts all auxiliary functions to the dynamAedesClass output.
  • Adds adci function that allows for substages statistics and merges space/non-space outputs.
  • Adds summary and max methods for class dynamAedesClass.
  • Removes dplyr from vignettes and packages.

dynamAedes 2.2.6

  • Introduces output object as a dynamAedesClass
  • Allows for species abbreviation at least 2 characters long (e.g., "ae")

dynamAedes 2.2.5

  • Removes definitely rgdal from package
  • Clears NAMESPACE

dynamAedes 2.2.0

  • Substitutes fields::rdist with terra::distance which solves a bug in active dispersal
  • Adds a switch for active dispersal only pDispersal=FALSE
  • Removes warnings changing Beta function with polynomial for egg survival in Aedes aegypti
  • Raised 0 hatching rate to 15°C for aegypti
  • Other minor cosmetic changes
  • Modify verbose option for debugging, now an integer with values 0 (silent), 1 or 2.

dynamAedes 2.1.2

  • Transitioning from 'rgdal' and 'sp' to 'terra'
  • Transitioning from 'insol' to 'geosphere'
  • Removing block-loading of 'tidyverse' (speeding up loading?)
  • Helper functions not exported any more

dynamAedes 2.1.1

  • Adding rgdal in the description

dynamAedes 2.1.0

  • Adding website with examples for the three scales (pkgdown)
  • Coordinates now internally transformed (if not in lat/long) for the derivation of the photoperiod
  • Adding option coords.proj4 to specify coordinate projection (in proj4 format)
  • Renaming dynamAedes as dynamAedes.m

dynamAedes 2.0.3

  • At regional scale now diapause derived pixel by pixel using the photoperiod of input coordinates.
  • You can now introduce diapause eggs using dynamAedes argument "intro.degg"

dynamAedes 2.0.2

  • Minor bug fix for idci and icci functions
  • Change option name for passive dispersal; option to use a numeric vector for average passive dispersal
  • Reshape vignette (simplified) for packaging
  • Change vignette builder to knitr
  • Add an initial test for reproducibility
  • Add code example for dynamAedes

dynamAedes 2.0.1

  • All functions reshaped for publication
  • Physiological rates updates
  • Vignette updated

dynamAedes 2.0.0

  • Enhanced physiological rates for koreicus/japonicus
  • Proportion of diapausing eggs dependent on photoperiod
  • Diapausing eggs with fixed survival
  • Diapausing eggs are laid only if photoperiod is decreasing and hatch only if photoperiod is rising.
  • Increased minimum duration of egg and juvenile stages to match species biology

dynamAedes 1.0.1

  • Functions to process the output are now integrated
  • Adding dispersal kernel for albopictus
  • README drafted
  • Package now compiles with CRAN standards

dynamAedes 1.0.0

First release which includes functions to:

  • Simulate life cycle