diff --git a/Dockerfile b/Dockerfile index 9a918e2..b05d3d5 100644 --- a/Dockerfile +++ b/Dockerfile @@ -1,16 +1,17 @@ # syntax=docker/dockerfile:1 -FROM continuumio/miniconda3 +FROM mambaorg/micromamba RUN useradd testuser &&\ mkdir /home/testuser &&\ chown -R testuser:testuser /opt/conda &&\ chown -R testuser:testuser /home/testuser USER testuser -RUN conda install python=3.7 -y &&\ - conda install git mobie_utils -c conda-forge -y &&\ +RUN mamba install python=3.7 -y &&\ + mamba install git mobie_utils -c conda-forge -y &&\ pip install render-python &&\ - pip install git+https://github.com/AllenInstitute/asap-modules/ --no-deps &&\ + pip install git+https://github.com/AllenInstitute/asap-modules/ &&\ pip install git+https://git.embl.de/schorb/pyem &&\ - pip install git+https://github.com/mobie/mobie-utils-python --no-deps + pip install git+https://github.com/mobie/mobie-utils-python --no-deps &&\ + pip install -r test_requirements.txt USER root CMD ["/bin/bash"]