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workspace precalculation

Jeremy Magland edited this page Sep 25, 2021 · 2 revisions

Workspace precalculation

This is in response to issue https://github.com/magland/sortingview/issues/144 "trigger precomputation of key views"

As of sortingview >= 0.6.12 it is possible to precalculate the extract snippets task from Python via:

# Note: you need to have a kachery daemon running with the FIGURL_CHANNEL environment variable set
workspace.precalculate()

If you build this step into the workspace creation pipeline, users don't need to wait in the figurl GUI for this time-consuming step to complete.

Note: Right now this only does the extract snippets step. In the future we could add additional precalculations in such as autocorrelograms or average waveforms.

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