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Q: ERROR: Could not build wheels for cykhash, which is required to install pyproject.toml-based projects

General Question

Status: Open.

#684 In macs3-project/MACS;

· Eunbi9561 opened on Feb 3, 2025

Q: the likelihood of bdgdiff

General Question

Status: Open.

#681 In macs3-project/MACS;

· BenxiaHu opened on Dec 13, 2024

Bug: No peaks detected in not-blacklisted regions when a blacklist is given to macs3 hmmratac

Bug Report

Status: Open.

#680 In macs3-project/MACS;

· MariaRig opened on Dec 5, 2024

Q: Haplotype genomes have no peak

General Question

Status: Open.

#679 In macs3-project/MACS;

· bigshark12345 opened on Dec 4, 2024

Q: AssertionError: No proper d can be found! Tweak --mfold?

General Question

Status: Open.

#677 In macs3-project/MACS;

· nanu23333 opened on Nov 22, 2024

About ATAC-seq call peak (hmmratac) and differential analysis via MACS3

Status: Open.

#676 In macs3-project/MACS;

· DayTimeMouse opened on Nov 19, 2024

Q: There's a huge difference between my peak number and the bio company's peak number

General Question

Status: Open.

#673 In macs3-project/MACS;

· bigshark12345 opened on Nov 14, 2024

Bug: NameError: name 'BedGraphIO' is not defined. Did you mean: 'bedGraphIO'?

Bug Report

Status: Open.

#672 In macs3-project/MACS;

· acv21 opened on Nov 13, 2024

Q: MACS3 hmmratac for single-cell ATAC-seq

General Question

Status: Open.

#671 In macs3-project/MACS;

· acv21 opened on Nov 11, 2024

Q: gappedPeak instead of narrow peak on HMMRATAC output

General Question

Status: Open.

#670 In macs3-project/MACS;

· jffpviana opened on Oct 29, 2024

Q: Filtering blacklisted regions when using macs3 hmmeratac

General Question

Status: Open.

#669 In macs3-project/MACS;

· eggrandio opened on Oct 24, 2024

Bug: Overflow error when using Poisson law for bdgcmp

Bug Report

Status: Open.

#667 In macs3-project/MACS;

· callum-b opened on Oct 22, 2024