diff --git a/analysis/src/oxDNA_analysis_tools/oxDNA_PDB.py b/analysis/src/oxDNA_analysis_tools/oxDNA_PDB.py index aaf79e6b..7b6de90b 100755 --- a/analysis/src/oxDNA_analysis_tools/oxDNA_PDB.py +++ b/analysis/src/oxDNA_analysis_tools/oxDNA_PDB.py @@ -230,8 +230,8 @@ def oxDNA_PDB(conf:Configuration, system:System, out_basename:str, protein_pdb_f Convert an oxDNA file to a PDB file. Directly writes the file. Parameters: - top_file (str) : Filename of oxDNA topology - conf_file (str) : Filename of oxDNA configuration + conf (Configuration) : The Configuration to convert + system (System) : The system topology for the configuration to convert out_basename (str) : Filename(-.pdb) to write out to protein_pdb_files (List[str]) : Filenames of pdb files corresponding to proteins present in the oxDNA files. Default: [] reverse (bool) : Reverse nucleic acid strands from oxDNA files (If you want 'correct' PDB files from backwards oxDNA files). Default: False