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clm3_0_ChangeLog
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===============================================================
Tag name: clm3_8_00
Originator(s): erik (erik)
Date: Tue May 4 22:39:18 MDT 2010
One-line Summary: Get future scenarios working, finalize documentation, bring in MEGAN VOC and CNDV, simplify, mksurfdata optimization, fix bugs: snow enthalpy, BMOZ, pergro, use pft weights from fsurdat NOT finidat
Purpose of changes:
Get all of the future scenarios working (other than rcp=6.0) and get all of the datasets
for these scenarios (pftdyn, fndepdyn, and aerdep files, for rcp=2.6,4.5, and 8.5).
Finalize the User's Guide for now, with reviews from: Sam, Keith, Dave, and Sean, as
well as more work on tools chapter, and adding testing chapter in appendix. We brought
in the MEGAN version of the Volatile Organic Compounds (VOC) module which also reads
in VOC emission factors from the surface dataset, and hence all fsurdat files needed
to be replaced. Along with this the mksurfdata tool was changed in order to handle VOC's
and effort was made to optimize it, add shared memory paralelism, and do memory
optimization. We also removed the old Dynamic Global Vegetation Model (DGVM) and replaced
it with the Carbon Nitrogen Dynamic Vegetation model (CNDV). Make some simplifications
in the configure system to always use the CCSM version of build files, remove some
unused options, put standalone test options last in configure. Improve documenation in
XML files for configure and build-namelist options.
Fix many different bugs. Enthalpy in snow combination was sometimes NOT conserved and now
is. There was a problem running DryDeposition for the BMOZ compset that is now fixed.
There were multiple issues running PERGRO testing that is now fixed. Previously, if
both the finidat file and the fsurdat file had PFT weights on them, the values from
the finidat file was used, now it will use the values from the fsurdat file. There are
also several cases where if the weights are different it will abort with an error, or
at least send a message to the log file about the differences.
Known bugs (include bugzilla ID):
701 (svn keyword)
717 (archiving bug -- only archive 1000 files at a time)
722 (threading slow)
789 (1pt sims 2.5X slow)
794 (hist avg strange)
883 (aerosol deposition not from atm)
896 (T62 mode does not work)
920 (glacier_mec problems in mksurfdata)
935 (RTM warning NOT an error)
990 (CN transient blowup)
994 (finidat files on jaguar for pftdyn fail)
1017 (SCM mode can NOT restart)
1025 (SCM mode can NOT use a global finidat file)
1063 (Problem in restarts for CCSM spinup data)
1092 (Problems running in debug mode on dublin with datm8)
1124 (Reported energy for pftdyn grid-cell not right)
1139 (LAND and PFTS 1D vector averaging doesn't work)
1147 (mkgriddata can't straddle over Greenwich)
1153 (Problem with ndeplintInterp for historical case)
1157 (Problem with VOC interpolation in mksurfdata)
http://bugs.cgd.ucar.edu/
Type of tag: doc
Describe any changes made to build system:
Switch cndv for dgvm, Have configure disallow bad cases
Change configure to NOT allow supln with spinup cases
Do NOT allow exit_spinup and ad_spinup at the same time.
Only allow voc to be set for seq_ccsm NOT ext_ccsm_seq
Remove carbon_aero and pio from configure (always build with pio)
emove unused configure options: clm_exe, -clm_exedir, and -clm_bld.
Move standalone testing options to the end of help. Use CCSM version
of mkSrcfiles/mkDepends, separate config vars into categories, work
on documentation with comments from Keith/Sam.
Describe any changes made to the namelist:
Add 2000-2100 simulation year range as allowed option
Two new history fields:
TSOI_10CM = soil temperature in top 10cm of soil (K)
SOILWATER_10CM = soil liquid water + ice in top 10cm of soil (kg/m2)
Check for some files based on rcp (fpftdyn, ndepdyn, and aerdep)
Add in ability to add a user namelist in your case directory to input
namelist items at configure time. Simply add a file called "user_nl_clm"
as a valid namelist and the items in that namelist will show up in the initial
BuildConf/clm.buildnml.csh file.
List any changes to the defaults for the boundary datasets:
get urbanc_alpha grid and frac files in
get in new single-point datasets
new qtr-degree, T62 and T85 fsurdat
new f10, f05, f09, 1850 fsurdat
new rcp=8.5, f19 pftdyn,
new rcp=4.5 f09, f19, f10 pftdyn
new rcp=2.6 f09, f19, f10 pftdyn
new rcp=8.5/4.5/2.6 f19 aerdep 1850-2100 datasets
new rcp=8.5/4.5 f19 fndepdyn 1850-2100 datasets
new rcp=2.6/4.5 f10, f45, f25, f09 aerdep/ndepdyn datasets
new rcp=2.6/4.5,8.5 f19 decadal averages for ndepdat
(Note: harvest was updated in PFTDYN files and raw PFT input files for 2006).
New 10x15 and 4x5 finidat files so that transient cases will work at those resolutions
New finidat files for 1-deg and 2-deg (from fully coupled simulations)
New datasets for I cases that are set in scripts
Duplicate cn datasets for cndv
New pft-physiology files with extra fields for CNDV
Remove 360x720 files, gx3v5, gx1v5 files
Remove 1x1.25, 2x2.5, and 2.5x3.33 grid resolutions
Remove gx1v3, gx1v4, gx1v5 land masks, add drydep defaults.
add mksrf_fvegtyp@1000-1004
Describe any substantial timing or memory changes: None
Code reviewed by:
snow changes came from dlawren and also reviewed by oleson
PFT weight change also reviewed by: dlawren, slevis, oleson
CNDV came from slevis
VOC changes came from Francis Vitt and Jean-Francois Lamarque
history changes came from Keith Oleson, reviewed by Dave Lawrenece
OpenMP bug fix came from Mariana-Vertenstein, reviewed by Pat Worley
List any svn externals directories updated (csm_share, mct, etc.): all
scripts to scripts4_100406a
drv to drvseq3_1_23
datm to datm8_100406
csm_share to share3_100407
pio to pio1_0_18
timing to timing_091021
Summary of testing:
bluefire: All PASS except...
025 smG41 TSM.sh 17p_sc_dh clm_pftdyn 10001230:NONE:1800 10x15 USGS@1000-1002 144 arb_ic ........FAIL! rc= 10
026 erG41 TER.sh 17p_sc_dh clm_pftdyn 10001230:NONE:1800 10x15 USGS@1000-1002 72+72 arb_ic ......FAIL! rc= 5
027 brG41 TBR.sh 17p_sc_dh clm_pftdyn 10001230:NONE:1800 10x15 USGS@1000-1002 72+72 arb_ic ......FAIL! rc= 5
028 blG41 TBL.sh 17p_sc_dh clm_pftdyn 10001230:NONE:1800 10x15 USGS@1000-1002 144 arb_ic ........FAIL! rc= 4
029 smG55 TSM.sh 17p_sc_h clm_pftdyn 10001230:NONE:1800 10x15 USGS@1000-1002 144 arb_ic .........FAIL! rc= 10
043 smLI1 TSM.sh _sc_dh clm_std 20020101:NONE:1800 94x192 T62 -10 arb_ic ........................FAIL! rc= 10
044 erLI1 TER.sh _sc_dh clm_std 20020101:NONE:1800 94x192 T62 -5+-5 arb_ic ......................FAIL! rc= 5
045 brLI1 TBR.sh _sc_dh clm_std 20020101:NONE:1800 94x192 T62 -10+-10 arb_ic ....................FAIL! rc= 5
046 blLI1 TBL.sh _sc_dh clm_std 20020101:NONE:1800 94x192 T62 -10 arb_ic ........................FAIL! rc= 4
048 erL58 TER.sh _sc_dh clm_std^nl_crcrop 20020115:NONE:1800 10x15 USGS 12+84 arb_ic ............FAIL! rc= 12
bluefire interactive testing: All PASS except...
013 blNB4 TBL.sh _nrmexsc_ds clm_urb1pt^nl_urb 19931201:NONE:3600 1x1_mexicocityMEX navy 157 arb_ic FAIL! rc= 5
019 blCA8 TBL.sh _nrsc_ds clm_std^nl_urb 20021230:NONE:3600 1x1_asphaltjungleNJ navy -90 arb_ic .FAIL! rc= 5
021 erAK4 TER.sh _sc_ds clm_std^nl_ptsmode 20030101:NONE:1800 1.9x2.5 gx1v6 -5+-5 cold ..........FAIL! rc= 7
022 brAK4 TBR.sh _sc_ds clm_std^nl_ptsmode 20030101:NONE:1800 1.9x2.5 gx1v6 -5+-5 cold ..........FAIL! rc= 6
026 brAK8 TBR.sh _sc_ds clm_std^nl_ptsmode_ocn 20030101:NONE:1800 1.9x2.5 gx1v6 -5+-5 cold ......FAIL! rc= 6
bluefire/CCSM testing: All PASS except
FAIL PST.f45_g37.I1850.bluefire.compare.clm3_7_10
FAIL PET_PT.f45_g37.I1850.bluefire.compare.clm3_7_10
FAIL ERB.f09_g16.I1850SPINUPCN.bluefire
BFAIL ERB.f09_g16.I1850SPINUPCN.bluefire.generate.clm3_7_15
BFAIL ERB.f09_g16.I1850SPINUPCN.bluefire.compare.clm3_7_10
FAIL ERH_D.f10_f10.I1850CN.bluefire.compare.clm3_7_10
BFAIL PST.f10_f10.I8520CN.bluefire.compare.clm3_7_10
BFAIL PET_PT.f10_f10.I8520CN.bluefire.compare.clm3_7_10
FAIL ERS_D.f19_g16.IRCP85CN.bluefire.compare_hist.clm3_7_10
FAIL ERS_D.f19_g16.IRCP85CN.bluefire.compare.clm3_7_10
jaguar: All PASS except..
005 smB51 TSM.sh _scsnf_dh clm_std^nl_urb 20021230:NONE:1800 10x15 USGS 144 arb_ic ..............FAIL! rc= 10
006 erB51 TER.sh _scsnf_dh clm_std^nl_urb 20021230:NONE:1800 10x15 USGS 72+72 arb_ic ............FAIL! rc= 5
007 brB51 TBR.sh _scsnf_dh clm_std^nl_urb 20021230:NONE:1800 10x15 USGS 72+72 arb_ic ............FAIL! rc= 5
026 smLI2 TSM.sh _sc_dm clm_std 20020101:NONE:1800 94x192 T62 -10 arb_ic ........................FAIL! rc= 10
027 erLI2 TER.sh _sc_dm clm_std 20020101:NONE:1800 94x192 T62 -5+-5 arb_ic ......................FAIL! rc= 5
028 brLI2 TBR.sh _sc_dm clm_std 20020101:NONE:1800 94x192 T62 -10+-10 arb_ic ....................FAIL! rc= 5
030 smL58 TSM.sh _sc_dh clm_std^nl_crcrop 20020115:NONE:1800 10x15 USGS 96 arb_ic ...............FAIL! rc= 10
031 erL58 TER.sh _sc_dh clm_std^nl_crcrop 20020115:NONE:1800 10x15 USGS 12+84 arb_ic ............FAIL! rc= 5
jaguar interactive testing: All PASS except...
006 erAK4 TER.sh _sc_ds clm_std^nl_ptsmode 20030101:NONE:1800 1.9x2.5 gx1v6 -5+-5 cold ..........FAIL! rc= 7
007 brAK4 TBR.sh _sc_ds clm_std^nl_ptsmode 20030101:NONE:1800 1.9x2.5 gx1v6 -5+-5 cold ..........FAIL! rc= 6
009 smG43 TSM.sh 17p_sc_do clm_pftdyn 10001230:NONE:1800 10x15 USGS@1000-1002 144 arb_ic ........FAIL! rc= 10
010 erG43 TER.sh 17p_sc_do clm_pftdyn 10001230:NONE:1800 10x15 USGS@1000-1002 72+72 arb_ic ......FAIL! rc= 5
011 brG43 TBR.sh 17p_sc_do clm_pftdyn 10001230:NONE:1800 10x15 USGS@1000-1002 72+72 arb_ic ......FAIL! rc= 5
edinburgh/ifort interactive testing: All PASS except...
006 erAL4 TER.sh _sc_ds clm_std^nl_ptsmode 20030101:NONE:1800 10x15 USGS -5+-5 cold .............FAIL! rc= 7
007 brAL4 TBR.sh _sc_ds clm_std^nl_ptsmode 20030101:NONE:1800 10x15 USGS -5+-5 cold .............FAIL! rc= 6
014 erOC4 TER.sh _nrvansc_ds clm_urb1pt^nl_urb 19920812:NONE:3600 1x1_vancouverCAN navy 115+115 arb_FAIL! rc= 5
015 brOC4 TBR.sh _nrvansc_ds clm_urb1pt^nl_urb_br 19920812:NONE:3600 1x1_vancouverCAN navy 72+72 arbFAIL! rc= 5
016 blOC4 TBL.sh _nrvansc_ds clm_urb1pt^nl_urb 19920812:NONE:3600 1x1_vancouverCAN navy 330 arb_ic FAIL! rc= 4
018 erNB4 TER.sh _nrmexsc_ds clm_urb1pt^nl_urb 19931201:NONE:3600 1x1_mexicocityMEX navy 57+100 arb_FAIL! rc= 5
019 brNB4 TBR.sh _nrmexsc_ds clm_urb1pt^nl_urb_br 19931201:NONE:3600 1x1_mexicocityMEX navy 72+72 arFAIL! rc= 5
020 blNB4 TBL.sh _nrmexsc_ds clm_urb1pt^nl_urb 19931201:NONE:3600 1x1_mexicocityMEX navy 157 arb_ic FAIL! rc= 4
edinburgh/ifort: All PASS except...
002 erA92 TER.sh _sc_dm clm_std^nl_urb 20030101:NONE:3600 4x5 gx3v7 -3+-3 arb_ic ................FAIL! rc= 7
003 brA92 TBR.sh _sc_dm clm_std^nl_urb_br 20030101:NONE:3600 4x5 gx3v7 -3+-3 arb_ic .............FAIL! rc= 6
006 erD91 TER.sh _persc_dh clm_per^nl_urb 20021231:NONE:1200 4x5 gx3v7 72+72 cold ...............FAIL! rc= 7
007 blD91 TBL.sh _persc_dh clm_per^nl_urb 20021231:NONE:1200 4x5 gx3v7 144 cold .................FAIL! rc= 5
008 smG42 TSM.sh 17p_sc_dm clm_pftdyn 10001230:NONE:1800 10x15 USGS@1000-1002 144 arb_ic ........FAIL! rc= 10
009 erG42 TER.sh 17p_sc_dm clm_pftdyn 10001230:NONE:1800 10x15 USGS@1000-1002 72+72 arb_ic ......FAIL! rc= 5
010 brG42 TBR.sh 17p_sc_dm clm_pftdyn 10001230:NONE:1800 10x15 USGS@1000-1002 72+72 arb_ic ......FAIL! rc= 5
011 blG42 TBL.sh 17p_sc_dm clm_pftdyn 10001230:NONE:1800 10x15 USGS@1000-1002 144 arb_ic ........FAIL! rc= 4
breeze,gale,hail,gust/ifort interactive testing: All PASS except...
011 blCA8 TBL.sh _nrsc_ds clm_std^nl_urb 20021230:NONE:3600 1x1_asphaltjungleNJ navy -90 arb_ic .FAIL! rc= 5
020 smG53 TSM.sh 17p_sc_do clm_pftdyn 10001230:NONE:1800 10x15 USGS@1000-1002 144 arb_ic ........FAIL! rc= 10
021 erG53 TER.sh 17p_sc_do clm_pftdyn 10001230:NONE:1800 10x15 USGS@1000-1002 10+38 arb_ic ......FAIL! rc= 5
022 brG53 TBR.sh 17p_sc_do clm_pftdyn 10001230:NONE:1800 10x15 USGS@1000-1002 72+72 arb_ic ......FAIL! rc= 5
023 blG53 TBL.sh 17p_sc_do clm_pftdyn 10001230:NONE:1800 10x15 USGS@1000-1002 144 arb_ic ........FAIL! rc= 4
CLM tag used for the baseline comparison tests if applicable: clm3_7_00
Changes answers relative to baseline: Yes!
snow change has a small effect on climate (see below)
Bringing in MEGAN VOC changes answers for VOC fluxes in a diagnostic way
Changing to use weights from fsurdat file rather than finidat file, changes
answers for cases with finidat startup files, if the weights are different.
IF tag changes answers relative to baseline comparison the
following should be filled in:
Summarize any changes to answers:
- what code configurations: All
- what platforms/compilers: All
- nature of change: same climate
If this tag changes climate describe the run(s) done to evaluate the new
climate in enough detail that it(they) could be reproduced, i.e.,
ccsm4_0_beta35
bluefire
-compset B_1850_TRACK1_CN -res f19_g16
MSS location of control simulations used to validate new climate:
/DLAWREN/csm/b40.1850.track1.2deg.003.snow
URL for LMWG diagnostics output used to validate new climate:
http://www.cgd.ucar.edu/ccr/paleo/b40.snow/b40.1850.track1.2deg.003.snow-b40.1850.track1.2deg.003.control/
http://www.cgd.ucar.edu/ccr/dlawren/research/clm4.0_dev/b40.1850.track1.2deg.003.snowa-b40.1850.track1.2deg.003.controla/setsIndex.html
===============================================================
===============================================================
Tag name: clm3_7_15
Originator(s): erik (erik)
Date: Tue Apr 27 10:13:57 MDT 2010
One-line Summary: Finish User's Guide, surfdata files for urban-1pt, fix mksurfdata ifort bugs, work with testing
Purpose of changes:
Fix all urban single-point datasets (mexicocity, urbanc_alpha), fix get_regional script
to work. Add more documentation on mksurfdata to users-guide, add pergro procedure
examples, more to testing section. Remove "moving the sun" warning. Fix
ndeplintInterp.ncl and getregional_datasets.ncl scripts.
Bugs fixed (include bugzilla ID):
1125 (T85, qtr-degree and urban pt surface datasets)
1143 (Problems with mksurfdata and ifort)
1144 (Bug in ndeplintInterp.ncl in calculation of time axis)
1150 (Bug in indices in getregional_datasets.ncl script)
Known bugs (include bugzilla ID):
701 (svn keyword)
717 (archiving bug -- only archive 1000 files at a time)
722 (threading slow)
789 (1pt sims 2.5X slow)
794 (hist avg strange)
883 (aerosol deposition not from atm)
896 (T62 mode does not work)
920 (glacier_mec problems in mksurfdata)
935 (RTM warning NOT an error)
990 (CN transient blowup)
994 (finidat files on jaguar for pftdyn fail)
1017 (SCM mode can NOT restart)
1025 (SCM mode can NOT use a global finidat file)
1063 (Problem in restarts for CCSM spinup data)
1092 (Problems running in debug mode on dublin with datm8)
1124 (Reported energy for pftdyn grid-cell not right)
1139 (LAND and PFTS 1D vector averaging doesn't work)
1147 (mkgriddata can't straddle over Greenwich)
1153 (Problem with ndeplintInterp for historical case)
1157 (Problem with VOC interpolation in mksurfdata)
http://bugs.cgd.ucar.edu/
Type of tag: std-test
Describe any changes made to build system: None
Describe any changes made to the namelist: None
List any changes to the defaults for the boundary datasets: New fsurdat files for urban-1p datasets
1x1_vancouverCAN, 1x1_mexicocityMEX, 1x1_urbanc_alpha, 1x1_asphaltjungleNJ
Describe any substantial timing or memory changes: None
Code reviewed by: self
List any svn externals directories updated (csm_share, mct, etc.): datm
datm to datm8_100406
List all files eliminated:
>>>>>>>>>>> Remove test lists no longer used
D models/lnd/clm/test/system/tests_pretag_bangkok
D models/lnd/clm/test/system/tests_pretag_calgary
D models/lnd/clm/test/system/tests_posttag_lightning_nompi
List all files added and what they do:
>>>>>>>>>>> Add plot of pergro testing
A models/lnd/clm/doc/UsersGuide/pergro.jpg
>>>>>>>>>>> Add in plotting for pergro testing
A models/lnd/clm/tools/ncl_scripts/RMSbluefire.dat
A models/lnd/clm/tools/ncl_scripts/RMSintrepid.dat
A models/lnd/clm/tools/ncl_scripts/pergroPlot.ncl
List all existing files that have been modified, and describe the changes:
>>>>>>>>>>> Remove tests no longer used, work on documentation
M models/lnd/clm/test/system/test_driver.sh ---- Remove calgary, work on doc
M models/lnd/clm/test/system/gen_test_table.sh - Remove note for calgary
M models/lnd/clm/test/system/README ------------ Clarify documentation
M models/lnd/clm/test/system/CLM_runcmnd.sh ---- Remove calgary
>>>>>>>>>>> Fix ifort compiler problems, point to $CSMDATA locations of 1850
>>>>>>>>>>> and 2000 PFT datasets
M models/lnd/clm/tools/mksurfdata/mksurfdata.globalirrig ---- Change path
M models/lnd/clm/tools/mksurfdata/pftdyn_hist_simyr2000.txt - Change path
M models/lnd/clm/tools/mksurfdata/mksurfdata.regional ------- Change path
M models/lnd/clm/tools/mksurfdata/mksurfdata.pftdyn --------- Change path
M models/lnd/clm/tools/mksurfdata/pftdyn_hist_simyr1850.txt - Change path
M models/lnd/clm/tools/mksurfdata/mksurfdata.singlept ------- Change path
M models/lnd/clm/tools/mksurfdata/mksurfdata.namelist ------- Change path
M models/lnd/clm/tools/mksurfdata/README -------------------- Update documentation
M models/lnd/clm/tools/mksurfdata/mksrfdat.F90 -------------- outnc_double to
.true., fix implicit none statements, add documentation
M models/lnd/clm/tools/mksurfdata/mksurfdata.pl ------------- Add ability to set
inputdata directory
M models/lnd/clm/tools/mksurfdata/creategridMod.F90 --------- Change where to loops
>>>>>>>>>>> Fix bug in time axis and getregional indices
M models/lnd/clm/tools/ncl_scripts/ndeplintInterp.ncl - Fix time axis and check it
M models/lnd/clm/tools/ncl_scripts/README ------------- Add note about pergroPlot
M models/lnd/clm/tools/ncl_scripts/getregional_datasets.ncl
>>>>>>>>>>> Fix CLM_USRDAT_NAME and add urban 1pt datasets
M models/lnd/clm/bld/clm.cpl7.template ------------------------ Set resolution for CLM_USRDAT_NAME
M models/lnd/clm/bld/namelist_files/namelist_defaults_clm.xml - New urban pt1
datasets: 1x1_vancouverCAN, 1x1_mexicocityMEX, 1x1_urbanc_alpha, 1x1_asphaltjungleNJ
>>>>>>>>>>> Remove SNICAR message about moving the sun
M models/lnd/clm/src/biogeophys/SNICARMod.F90
>>>>>>>>>>> Finish off current User's Guide
>>>>>>>>>>> Bring rel03->rel04 updates in, run ispell on everything
>>>>>>>>>>> Work on mksurfdata and testing sections, give instructions for pergro
>>>>>>>>>>> Add help from mksurfdata.pl and test_driver.sh scripts
M models/lnd/clm/doc/KnownBugs -- Add note that mkgriddata can not straddle Greenwich
M models/lnd/clm/doc/UsersGuide/tools.xml
M models/lnd/clm/doc/UsersGuide/preface.xml
M models/lnd/clm/doc/UsersGuide/clm_ug.xml
M models/lnd/clm/doc/UsersGuide/adding_files.xml
M models/lnd/clm/doc/UsersGuide/appendix.xml
M models/lnd/clm/doc/UsersGuide/config_cache.xml
M models/lnd/clm/doc/UsersGuide/custom.xml
M models/lnd/clm/doc/UsersGuide/single_point.xml
M models/lnd/clm/doc/UsersGuide/Makefile
M models/lnd/clm/doc/UsersGuide/addco2_datm.buildnml.diff
M models/lnd/clm/doc/UsersGuide/special_cases.xml
Summary of testing:
bluefire: All PASS except...
025 smG41 TSM.sh 17p_sc_dh clm_pftdyn 10001230:NONE:1800 10x15 USGS@1000-1002 144 arb_ic ........FAIL! rc= 10
026 erG41 TER.sh 17p_sc_dh clm_pftdyn 10001230:NONE:1800 10x15 USGS@1000-1002 72+72 arb_ic ......FAIL! rc= 5
027 brG41 TBR.sh 17p_sc_dh clm_pftdyn 10001230:NONE:1800 10x15 USGS@1000-1002 72+72 arb_ic ......FAIL! rc= 5
028 blG41 TBL.sh 17p_sc_dh clm_pftdyn 10001230:NONE:1800 10x15 USGS@1000-1002 144 arb_ic ........FAIL! rc= 4
029 smG55 TSM.sh 17p_sc_h clm_pftdyn 10001230:NONE:1800 10x15 USGS@1000-1002 144 arb_ic .........FAIL! rc= 10
043 smLI1 TSM.sh _sc_dh clm_std 20020101:NONE:1800 94x192 T62 -10 arb_ic ........................FAIL! rc= 10
044 erLI1 TER.sh _sc_dh clm_std 20020101:NONE:1800 94x192 T62 -5+-5 arb_ic ......................FAIL! rc= 5
045 brLI1 TBR.sh _sc_dh clm_std 20020101:NONE:1800 94x192 T62 -10+-10 arb_ic ....................FAIL! rc= 5
046 blLI1 TBL.sh _sc_dh clm_std 20020101:NONE:1800 94x192 T62 -10 arb_ic ........................FAIL! rc= 4
048 erL58 TER.sh _sc_dh clm_std^nl_crcrop 20020115:NONE:1800 10x15 USGS 12+84 arb_ic ............FAIL! rc= 12
bluefire interactive testing: All PASS except...
013 blNB4 TBL.sh _nrmexsc_ds clm_urb1pt^nl_urb 19931201:NONE:3600 1x1_mexicocityMEX navy 157 arb_ic FAIL! rc= 5
019 blCA8 TBL.sh _nrsc_ds clm_std^nl_urb 20021230:NONE:3600 1x1_asphaltjungleNJ navy -90 arb_ic .FAIL! rc= 5
021 erAK4 TER.sh _sc_ds clm_std^nl_ptsmode 20030101:NONE:1800 1.9x2.5 gx1v6 -5+-5 cold ..........FAIL! rc= 7
022 brAK4 TBR.sh _sc_ds clm_std^nl_ptsmode 20030101:NONE:1800 1.9x2.5 gx1v6 -5+-5 cold ..........FAIL! rc= 6
026 brAK8 TBR.sh _sc_ds clm_std^nl_ptsmode_ocn 20030101:NONE:1800 1.9x2.5 gx1v6 -5+-5 cold ......FAIL! rc= 6
bluefire/CCSM testing: All PASS except
FAIL PST.f45_g37.I1850.bluefire.compare.clm3_7_10
FAIL PET_PT.f45_g37.I1850.bluefire.compare.clm3_7_10
FAIL ERB.f09_g16.I1850SPINUPCN.bluefire
BFAIL ERB.f09_g16.I1850SPINUPCN.bluefire.generate.clm3_7_15
BFAIL ERB.f09_g16.I1850SPINUPCN.bluefire.compare.clm3_7_10
FAIL ERH_D.f10_f10.I1850CN.bluefire.compare.clm3_7_10
BFAIL PST.f10_f10.I8520CN.bluefire.compare.clm3_7_10
BFAIL PET_PT.f10_f10.I8520CN.bluefire.compare.clm3_7_10
FAIL ERS_D.f19_g16.IRCP85CN.bluefire.compare_hist.clm3_7_10
FAIL ERS_D.f19_g16.IRCP85CN.bluefire.compare.clm3_7_10
jaguar: All PASS except..
005 smB51 TSM.sh _scsnf_dh clm_std^nl_urb 20021230:NONE:1800 10x15 USGS 144 arb_ic ..............FAIL! rc= 10
006 erB51 TER.sh _scsnf_dh clm_std^nl_urb 20021230:NONE:1800 10x15 USGS 72+72 arb_ic ............FAIL! rc= 5
007 brB51 TBR.sh _scsnf_dh clm_std^nl_urb 20021230:NONE:1800 10x15 USGS 72+72 arb_ic ............FAIL! rc= 5
026 smLI2 TSM.sh _sc_dm clm_std 20020101:NONE:1800 94x192 T62 -10 arb_ic ........................FAIL! rc= 10
027 erLI2 TER.sh _sc_dm clm_std 20020101:NONE:1800 94x192 T62 -5+-5 arb_ic ......................FAIL! rc= 5
028 brLI2 TBR.sh _sc_dm clm_std 20020101:NONE:1800 94x192 T62 -10+-10 arb_ic ....................FAIL! rc= 5
030 smL58 TSM.sh _sc_dh clm_std^nl_crcrop 20020115:NONE:1800 10x15 USGS 96 arb_ic ...............FAIL! rc= 10
031 erL58 TER.sh _sc_dh clm_std^nl_crcrop 20020115:NONE:1800 10x15 USGS 12+84 arb_ic ............FAIL! rc= 5
jaguar interactive testing: All PASS except...
006 erAK4 TER.sh _sc_ds clm_std^nl_ptsmode 20030101:NONE:1800 1.9x2.5 gx1v6 -5+-5 cold ..........FAIL! rc= 7
007 brAK4 TBR.sh _sc_ds clm_std^nl_ptsmode 20030101:NONE:1800 1.9x2.5 gx1v6 -5+-5 cold ..........FAIL! rc= 6
009 smG43 TSM.sh 17p_sc_do clm_pftdyn 10001230:NONE:1800 10x15 USGS@1000-1002 144 arb_ic ........FAIL! rc= 10
010 erG43 TER.sh 17p_sc_do clm_pftdyn 10001230:NONE:1800 10x15 USGS@1000-1002 72+72 arb_ic ......FAIL! rc= 5
011 brG43 TBR.sh 17p_sc_do clm_pftdyn 10001230:NONE:1800 10x15 USGS@1000-1002 72+72 arb_ic ......FAIL! rc= 5
edinburgh/ifort interactive testing: All PASS except...
006 erAL4 TER.sh _sc_ds clm_std^nl_ptsmode 20030101:NONE:1800 10x15 USGS -5+-5 cold .............FAIL! rc= 7
007 brAL4 TBR.sh _sc_ds clm_std^nl_ptsmode 20030101:NONE:1800 10x15 USGS -5+-5 cold .............FAIL! rc= 6
014 erOC4 TER.sh _nrvansc_ds clm_urb1pt^nl_urb 19920812:NONE:3600 1x1_vancouverCAN navy 115+115 arb_FAIL! rc= 5
015 brOC4 TBR.sh _nrvansc_ds clm_urb1pt^nl_urb_br 19920812:NONE:3600 1x1_vancouverCAN navy 72+72 arbFAIL! rc= 5
016 blOC4 TBL.sh _nrvansc_ds clm_urb1pt^nl_urb 19920812:NONE:3600 1x1_vancouverCAN navy 330 arb_ic FAIL! rc= 4
018 erNB4 TER.sh _nrmexsc_ds clm_urb1pt^nl_urb 19931201:NONE:3600 1x1_mexicocityMEX navy 57+100 arb_FAIL! rc= 5
019 brNB4 TBR.sh _nrmexsc_ds clm_urb1pt^nl_urb_br 19931201:NONE:3600 1x1_mexicocityMEX navy 72+72 arFAIL! rc= 5
020 blNB4 TBL.sh _nrmexsc_ds clm_urb1pt^nl_urb 19931201:NONE:3600 1x1_mexicocityMEX navy 157 arb_ic FAIL! rc= 4
edinburgh/ifort: All PASS except...
002 erA92 TER.sh _sc_dm clm_std^nl_urb 20030101:NONE:3600 4x5 gx3v7 -3+-3 arb_ic ................FAIL! rc= 7
003 brA92 TBR.sh _sc_dm clm_std^nl_urb_br 20030101:NONE:3600 4x5 gx3v7 -3+-3 arb_ic .............FAIL! rc= 6
006 erD91 TER.sh _persc_dh clm_per^nl_urb 20021231:NONE:1200 4x5 gx3v7 72+72 cold ...............FAIL! rc= 7
007 blD91 TBL.sh _persc_dh clm_per^nl_urb 20021231:NONE:1200 4x5 gx3v7 144 cold .................FAIL! rc= 5
008 smG42 TSM.sh 17p_sc_dm clm_pftdyn 10001230:NONE:1800 10x15 USGS@1000-1002 144 arb_ic ........FAIL! rc= 10
009 erG42 TER.sh 17p_sc_dm clm_pftdyn 10001230:NONE:1800 10x15 USGS@1000-1002 72+72 arb_ic ......FAIL! rc= 5
010 brG42 TBR.sh 17p_sc_dm clm_pftdyn 10001230:NONE:1800 10x15 USGS@1000-1002 72+72 arb_ic ......FAIL! rc= 5
011 blG42 TBL.sh 17p_sc_dm clm_pftdyn 10001230:NONE:1800 10x15 USGS@1000-1002 144 arb_ic ........FAIL! rc= 4
breeze,gale,hail,gust/ifort interactive testing: All PASS except...
011 blCA8 TBL.sh _nrsc_ds clm_std^nl_urb 20021230:NONE:3600 1x1_asphaltjungleNJ navy -90 arb_ic .FAIL! rc= 5
020 smG53 TSM.sh 17p_sc_do clm_pftdyn 10001230:NONE:1800 10x15 USGS@1000-1002 144 arb_ic ........FAIL! rc= 10
021 erG53 TER.sh 17p_sc_do clm_pftdyn 10001230:NONE:1800 10x15 USGS@1000-1002 10+38 arb_ic ......FAIL! rc= 5
022 brG53 TBR.sh 17p_sc_do clm_pftdyn 10001230:NONE:1800 10x15 USGS@1000-1002 72+72 arb_ic ......FAIL! rc= 5
023 blG53 TBL.sh 17p_sc_do clm_pftdyn 10001230:NONE:1800 10x15 USGS@1000-1002 144 arb_ic ........FAIL! rc= 4
CLM tag used for the baseline comparison tests if applicable: clm3_7_14
Changes answers relative to baseline: No bit-for-bit
===============================================================
===============================================================
Tag name: clm3_7_14
Originator(s): erik (Kluzek Erik 1326 CGD)
Date: Thu Apr 8 16:15:35 MDT 2010
One-line Summary: Fix rcp=2.6/4.5 1-degree fndepdyn filenames
Purpose of changes:
Fix the names of the rcp=2.6/4.5 1-degree fndepdyn filenames (had a 100208 file creation
date but should be 100407).
Bugs fixed (include bugzilla ID): None
Known bugs (include bugzilla ID):
701 (svn keyword)
717 (archiving bug -- only archive 1000 files at a time)
722 (threading slow)
789 (1pt sims 2.5X slow)
794 (hist avg strange)
883 (aerosol deposition not from atm)
896 (T62 mode does not work)
920 (glacier_mec problems in mksurfdata)
935 (RTM warning NOT an error)
990 (CN transient blowup)
994 (finidat files on jaguar for pftdyn fail)
1017 (SCM mode can NOT restart)
1025 (SCM mode can NOT use a global finidat file)
1063 (Problem in restarts for CCSM spinup data)
1092 (Problems running in debug mode on dublin with datm8)
1124 (Reported energy for pftdyn grid-cell not right)
1125 (T85, qtr-degree and urban pt surface datasets)
1139 (LAND and PFTS 1D vector averaging doesn't work)
1143 (Problems with mksurfdata and ifort)
1144 (Bug in ndeplintInterp.ncl in calculation of time axis)
1147 (mkgriddata can't straddle over Greenwich)
1153 (Problem with ndeplintInterp for historical case)
1157 (Problem with VOC interpolation in mksurfdata)
http://bugs.cgd.ucar.edu/
Describe any changes made to build system: None
Describe any changes made to the namelist: None
List any changes to the defaults for the boundary datasets: Fix fndepdyn filenames
Describe any substantial timing or memory changes: None
Code reviewed by: self
List any svn externals directories updated (csm_share, mct, etc.): None
List all files eliminated: None
List all files added and what they do: None
List all existing files that have been modified, and describe the changes:
M models/lnd/clm/bld/namelist_files/namelist_defaults_clm.xml - Fix fndepdyn filenames
Summary of testing: None
===============================================================
===============================================================
Tag name: clm3_7_13
Originator(s): erik (Kluzek Erik 1326 CGD)
Date: Thu Apr 8 10:53:06 MDT 2010
One-line Summary: Add in missing rcp=2.6/6 use-cases, and fix syntax errors in the namelist_defaults file
Purpose of changes:
Add in missing use cases for rcp=4.5 and rcp=6 transient future scenarios. Fix syntax errors in the namelist_defaults_clm
file.
Bugs fixed (include bugzilla ID): Above two problems
Known bugs (include bugzilla ID):
701 (svn keyword)
717 (archiving bug -- only archive 1000 files at a time)
722 (threading slow)
789 (1pt sims 2.5X slow)
794 (hist avg strange)
883 (aerosol deposition not from atm)
896 (T62 mode does not work)
920 (glacier_mec problems in mksurfdata)
935 (RTM warning NOT an error)
990 (CN transient blowup)
994 (finidat files on jaguar for pftdyn fail)
1017 (SCM mode can NOT restart)
1025 (SCM mode can NOT use a global finidat file)
1063 (Problem in restarts for CCSM spinup data)
1092 (Problems running in debug mode on dublin with datm8)
1124 (Reported energy for pftdyn grid-cell not right)
1125 (T85, qtr-degree and urban pt surface datasets)
1139 (LAND and PFTS 1D vector averaging doesn't work)
1143 (Problems with mksurfdata and ifort)
1144 (Bug in ndeplintInterp.ncl in calculation of time axis)
1147 (mkgriddata can't straddle over Greenwich)
1153 (Problem with ndeplintInterp for historical case)
1157 (Problem with VOC interpolation in mksurfdata)
http://bugs.cgd.ucar.edu/
Describe any changes made to build system: None
Describe any changes made to the namelist: None
List any changes to the defaults for the boundary datasets: Nonae
Describe any substantial timing or memory changes: None
Code reviewed by: self
List any svn externals directories updated (csm_share, mct, etc.): None
List all files eliminated: None
List all files added and what they do:
A models/lnd/clm/bld/namelist_files/use_cases/1850-2100_rcp2.6_transient.xml
A models/lnd/clm/bld/namelist_files/use_cases/1850-2100_rcp6_transient.xml
List all existing files that have been modified, and describe the changes:
M models/lnd/clm/bld/namelist_files/namelist_defaults_clm.xml - Fix syntax errors
Summary of testing: None, other than script creation testing
===============================================================
===============================================================
Tag name: clm3_7_12
Originator(s): erik (erik)
Date: Thu Apr 8 00:30:30 MDT 2010
One-line Summary: rcp=2.6/4.5 datasets for fndepdyn and aerdepdat, fix some minor issues, new 1pt urban surfdata files
Purpose of changes:
Add in urban single-point surfdata files. Add in regridded ndepdyn/aerdep files: f09,
f45, f10, f25. Fix name of f05, 1850 fsurdat file, add in new urban single point
datasets, add back urbanc_alpha grid/frac files. Put rcp in filenames for aerdep/ndep
regrid scripts. chomp frac filename in mksurfdata.pl, for urban single-point files. Make
OPT=TRUE default for mksurfdata. Lengthen allowed gridname for mksurfdata.
Bugs fixed (include bugzilla ID): None
Known bugs (include bugzilla ID):
701 (svn keyword)
717 (archiving bug -- only archive 1000 files at a time)
722 (threading slow)
789 (1pt sims 2.5X slow)
794 (hist avg strange)
883 (aerosol deposition not from atm)
896 (T62 mode does not work)
920 (glacier_mec problems in mksurfdata)
935 (RTM warning NOT an error)
990 (CN transient blowup)
994 (finidat files on jaguar for pftdyn fail)
1017 (SCM mode can NOT restart)
1025 (SCM mode can NOT use a global finidat file)
1063 (Problem in restarts for CCSM spinup data)
1092 (Problems running in debug mode on dublin with datm8)
1124 (Reported energy for pftdyn grid-cell not right)
1125 (T85, qtr-degree and urban pt surface datasets)
1139 (LAND and PFTS 1D vector averaging doesn't work)
1143 (Problems with mksurfdata and ifort)
1144 (Bug in ndeplintInterp.ncl in calculation of time axis)
1147 (mkgriddata can't straddle over Greenwich)
1153 (Problem with ndeplintInterp for historical case)
1157 (Problem with VOC interpolation in mksurfdata)
http://bugs.cgd.ucar.edu/
Describe any changes made to build system: None
Describe any changes made to the namelist: None
List any changes to the defaults for the boundary datasets:
aerdep/ndepdyn for rcp=2.6/4.5 f10, f45, f25, f09
fix name of f05 fsurdata file for 1850
get urbanc_alpha grid and frac files in
get in new urban single-point datasets
Describe any substantial timing or memory changes: None
Code reviewed by: self
List any svn externals directories updated (csm_share, mct, etc.):
csm_share to share3_100407
List all files eliminated: None
List all files added and what they do: None
List all existing files that have been modified, and describe the changes:
M models/lnd/clm/tools/mksurfdata/Makefile ------ make OPT=TRUE the default
M models/lnd/clm/tools/mksurfdata/mksrfdat.F90 -- lengthen gridname to 32
M models/lnd/clm/tools/mksurfdata/mksurfdata.pl - make sure to chomp fracdata file
M models/lnd/clm/tools/ncl_scripts/aerdepregrid.ncl - Add rcp to filename
M models/lnd/clm/tools/ncl_scripts/ndepregrid.ncl --- Add rcp to filename
M models/lnd/clm/bld/namelist_files/namelist_defaults_clm.xml - New datasets
aerdep/ndepdyn for rcp=2.6/4.5 f10, f45, f25, f09
fix name of f05 fsurdata file for 1850
get urbanc_alpha grid and frac files in
get in new urban single-point datasets
Summary of testing:
bluefire interactive testing: All PASS except up to 014 smJ74
010 smNB4 TSM.sh _nrmexsc_ds clm_urb1pt^nl_urb 19931201:NONE:3600 1x1_mexicocityMEX navy 157 arb_ic FAIL! rc= 10
011 erNB4 TER.sh _nrmexsc_ds clm_urb1pt^nl_urb 19931201:NONE:3600 1x1_mexicocityMEX navy 57+100 arb_FAIL! rc= 5
012 brNB4 TBR.sh _nrmexsc_ds clm_urb1pt^nl_urb_br 19931201:NONE:3600 1x1_mexicocityMEX navy 72+72 arFAIL! rc= 5
breeze,gale,hail,gust/ifort interactive testing: All PASS up to...
010 smCA8 TSM.sh _nrsc_ds clm_std^nl_urb 20021230:NONE:3600 1x1_asphaltjungleNJ navy -90 arb_ic .FAIL! rc= 10
===============================================================
===============================================================
Tag name: clm3_7_11
Originator(s): erik (erik)
Date: Wed Apr 7 11:59:22 MDT 2010
One-line Summary: qtr-degree and T85 surfdata, rcp=2.6/4.5 datasets, doc updates
Purpose of changes:
Documentation updates, for users guide and namelist and configure xml files (rel04 to
rel05 update). Fix missing deallocate (bug 1133), and line length for NEE. Changes in
mksurfdata so that will run for qtr-degree. New rcp datasets for 4.5 and 2.6, aerdep
(only f19)/ndepdyn/pftdyn datasets. Fix CN spinup test, fix test name for bluefire tests.
Add in qtr-degree and T85 surfdata files.
Bugs fixed (include bugzilla ID):
1141 (CN spinup test)
1137 (qtr-deg fsurdat)
1136 (line length for NEE in histFlds)
1135 (miss smG45 test)
1133 (missing deallocate)
1125 (T85, qtr-degree and urban pt surface datasets)
(partial T85 and qtr-degree)
Known bugs (include bugzilla ID):
701 (svn keyword)
717 (archiving bug -- only archive 1000 files at a time)
722 (threading slow)
789 (1pt sims 2.5X slow)
794 (hist avg strange)
883 (aerosol deposition not from atm)
896 (T62 mode does not work)
920 (glacier_mec problems in mksurfdata)
935 (RTM warning NOT an error)
990 (CN transient blowup)
994 (finidat files on jaguar for pftdyn fail)
1017 (SCM mode can NOT restart)
1025 (SCM mode can NOT use a global finidat file)
1063 (Problem in restarts for CCSM spinup data)
1092 (Problems running in debug mode on dublin with datm8)
1124 (Reported energy for pftdyn grid-cell not right)
1125 (T85, qtr-degree and urban pt surface datasets)
1139 (LAND and PFTS 1D vector averaging doesn't work)
1143 (Problems with mksurfdata and ifort)
1144 (Bug in ndeplintInterp.ncl in calculation of time axis)
1147 (mkgriddata can't straddle over Greenwich)
1153 (Problem with ndeplintInterp for historical case)
1157 (Problem with VOC interpolation in mksurfdata)
http://bugs.cgd.ucar.edu/
Describe any changes made to build system: None
Describe any changes made to the namelist: None
List any changes to the defaults for the boundary datasets:
new qtr-degree and T85 fsurdat
new rcp=8.5, f19 pftdyn, rcp=4.5 f09, f19, f10 pftdyn
new rcp=2.6 f09, f19, f10 pftdyn
new rcp=4.5/2.6 f19 aerdep 1850-2100 datasets
Describe any substantial timing or memory changes: None
Code reviewed by: self
List any svn externals directories updated (csm_share, mct, etc.): scripts, drv
scripts to scripts4_100406a
drv to drvseq3_1_23
List all files eliminated:
D models/lnd/clm/tools/mksurfdata/pftdyn_simyr1850.txt -- Rename with _hist_
D models/lnd/clm/tools/mksurfdata/pftdyn_simyr2000.txt -- Rename with _hist_
List all files added and what they do:
A models/lnd/clm/tools/mksurfdata/pftdyn_hist_simyr2000.txt - Renamed from above
A models/lnd/clm/tools/mksurfdata/pftdyn_hist_simyr1850.txt - Renamed from above
List all existing files that have been modified, and describe the changes:
>>>>>>>>>>>>> Turn supln off for spinup modes
M models/lnd/clm/test/system/config_files/17p_cnexitspinupsc_dh
M models/lnd/clm/test/system/config_files/17p_cnexitspinupsc_dm
M models/lnd/clm/test/system/config_files/17p_cnexitspinupsc_do
M models/lnd/clm/test/system/config_files/17p_cnadspinupsc_dh
M models/lnd/clm/test/system/config_files/17p_cnadspinupsc_dm
M models/lnd/clm/test/system/config_files/17p_cnadspinupsc_do
M models/lnd/clm/test/system/tests_pretag_bluefire --------------- Change name of missing test smG45->smG55
>>>>>>>>>>>>> Change names of pftdyn text files to include _hist_
>>>>>>>>>>>>> Memory updates so uses less memory (allocate just before needed
>>>>>>>>>>>>> deallocate after done). This is from the ccsm4_0_rel05 update
>>>>>>>>>>>>> Mariana started the changes and Erik added some more.
M models/lnd/clm/tools/mksurfdata/mksurfdata.namelist
M models/lnd/clm/tools/mksurfdata/mksurfdata.globalirrig
M models/lnd/clm/tools/mksurfdata/mksurfdata.regional
M models/lnd/clm/tools/mksurfdata/mksurfdata.singlept
M models/lnd/clm/tools/mksurfdata/README
M models/lnd/clm/tools/mksurfdata/mkurbanparMod.F90 ----- Memory updates
M models/lnd/clm/bld/clm.cpl7.template - Use $CASETOOLS for Makefile
M models/lnd/clm/bld/namelist_files/namelist_defaults_clm.xml -
new qtr-degree and T85 fsurdat
new rcp=8.5, f19 pftdyn, rcp=4.5 f09, f19, f10 pftdyn
new rcp=2.6 f09, f19, f10 pftdyn
new rcp=4.5/2.6 f19 aerdep 1850-2100 datasets
>>>>>>>>>>>>> Documentation udpates updating from rel04 to ccsm4_0_rel05
M models/lnd/clm/bld/configure -------------------------- change CVS to SVN
M models/lnd/clm/bld/config_files/config_definition.xsl - Correct name
M models/lnd/clm/bld/config_files/config_definition.xml - Add category for maxpft
M models/lnd/clm/bld/namelist_files/namelist_definition.xml - Work with categories
and improve descriptions, remove rpntpath
M models/lnd/clm/bld/namelist_files/namelist_definition.xsl - Seperate out
stand-alone testing categories, improve documentation, work
on categories.
>>>>>>>>>>>>> Documentation udpates updating from rel04 to ccsm4_0_rel05
>>>>>>>>>>>>> Updates from Sam, Keith, and Sean, more doc on tools and appendix
M models/lnd/clm/doc/UsersGuide/co2_streams.txt
M models/lnd/clm/doc/UsersGuide/tools.xml
M models/lnd/clm/doc/UsersGuide/preface.xml
M models/lnd/clm/doc/UsersGuide/clm_stylesheet.dsl
M models/lnd/clm/doc/UsersGuide/clm_ug.xml
M models/lnd/clm/doc/UsersGuide/adding_files.xml
M models/lnd/clm/doc/UsersGuide/appendix.xml
M models/lnd/clm/doc/UsersGuide/custom.xml
M models/lnd/clm/doc/UsersGuide/single_point.xml
M models/lnd/clm/doc/UsersGuide/Makefile
M models/lnd/clm/doc/UsersGuide/addco2_datm.buildnml.diff
M models/lnd/clm/doc/UsersGuide/special_cases.xml
M models/lnd/clm/doc/KnownBugs --------------------------- Add notes on:
bugzilla bugs: 669, 1024, 1124, 1125, 1127
M models/lnd/clm/src/main/accFldsMod.F90 -- Deallocate outside #ifdef
M models/lnd/clm/src/main/histFldsMod.F90 - Shorten long line for NEE
Summary of testing:
bluefire: All PASS up to 024, blHN1 test except...
025 smG41 TSM.sh 17p_sc_dh clm_pftdyn 10001230:NONE:1800 10x15 USGS@1000-1002 144 arb_ic ........FAIL! rc= 10
026 erG41 TER.sh 17p_sc_dh clm_pftdyn 10001230:NONE:1800 10x15 USGS@1000-1002 72+72 arb_ic ......FAIL! rc= 5
027 brG41 TBR.sh 17p_sc_dh clm_pftdyn 10001230:NONE:1800 10x15 USGS@1000-1002 72+72 arb_ic ......FAIL! rc= 5
028 blG41 TBL.sh 17p_sc_dh clm_pftdyn 10001230:NONE:1800 10x15 USGS@1000-1002 144 arb_ic ........FAIL! rc= 4
bluefire interactive testing: All PASS except (up to 26 brAK8 test)
006 smCA4 TSM.sh _nrsc_ds clm_std^nl_urb 20021001:NONE:3600 1x1_camdenNJ navy -90 arb_ic ........FAIL! rc= 10
007 erCA4 TER.sh _nrsc_ds clm_std^nl_urb 20021001:NONE:3600 1x1_camdenNJ navy -45+-45 arb_ic ....FAIL! rc= 5
008 brCA4 TBR.sh _nrsc_ds clm_std^nl_urb_br 20021001:NONE:3600 1x1_camdenNJ navy -10+-10 arb_ic .FAIL! rc= 5
009 blCA4 TBL.sh _nrsc_ds clm_std^nl_urb 20021001:NONE:3600 1x1_camdenNJ navy -90 arb_ic ........FAIL! rc= 4
010 smNB4 TSM.sh _nrmexsc_ds clm_urb1pt^nl_urb 19931201:NONE:3600 1x1_mexicocityMEX navy 157 arb_ic FAIL! rc= 10
011 erNB4 TER.sh _nrmexsc_ds clm_urb1pt^nl_urb 19931201:NONE:3600 1x1_mexicocityMEX navy 57+100 arb_FAIL! rc= 5
012 brNB4 TBR.sh _nrmexsc_ds clm_urb1pt^nl_urb_br 19931201:NONE:3600 1x1_mexicocityMEX navy 72+72 arFAIL! rc= 5
013 blNB4 TBL.sh _nrmexsc_ds clm_urb1pt^nl_urb 19931201:NONE:3600 1x1_mexicocityMEX navy 157 arb_ic FAIL! rc= 4
018 smCA8 TSM.sh _nrsc_ds clm_std^nl_urb 20021230:NONE:3600 1x1_asphaltjungleNJ navy -90 arb_ic .FAIL! rc= 10
019 blCA8 TBL.sh _nrsc_ds clm_std^nl_urb 20021230:NONE:3600 1x1_asphaltjungleNJ navy -90 arb_ic .FAIL! rc= 4
021 erAK4 TER.sh _sc_ds clm_std^nl_ptsmode 20030101:NONE:1800 1.9x2.5 gx1v6 -5+-5 cold ..........FAIL! rc= 7
022 brAK4 TBR.sh _sc_ds clm_std^nl_ptsmode 20030101:NONE:1800 1.9x2.5 gx1v6 -5+-5 cold ..........FAIL! rc= 6
026 brAK8 TBR.sh _sc_ds clm_std^nl_ptsmode_ocn 20030101:NONE:1800 1.9x2.5 gx1v6 -5+-5 cold ......FAIL! rc= 6
jaguar interactive testing: All PASS up to smAK4 test except...
006 erAK4 TER.sh _sc_ds clm_std^nl_ptsmode 20030101:NONE:1800 1.9x2.5 gx1v6 -5+-5 cold ..........FAIL! rc= 7
007 brAK4 TBR.sh _sc_ds clm_std^nl_ptsmode 20030101:NONE:1800 1.9x2.5 gx1v6 -5+-5 cold ..........FAIL! rc= 6
008 blAK4 TBL.sh _sc_ds clm_std^nl_ptsmode 20030101:NONE:1800 1.9x2.5 gx1v6 -10 cold ............SKIPPED*
009 smG43 TSM.sh 17p_sc_do clm_pftdyn 10001230:NONE:1800 10x15 USGS@1000-1002 144 arb_ic ........FAIL! rc= 10
010 erG43 TER.sh 17p_sc_do clm_pftdyn 10001230:NONE:1800 10x15 USGS@1000-1002 72+72 arb_ic ......FAIL! rc= 5
011 brG43 TBR.sh 17p_sc_do clm_pftdyn 10001230:NONE:1800 10x15 USGS@1000-1002 72+72 arb_ic ......FAIL! rc= 5
breeze,gale,hail,gust/ifort interactive testing: All PASS up to...
008 smCA4 TSM.sh _nrsc_ds clm_std^nl_urb 20021001:NONE:3600 1x1_camdenNJ navy -90 arb_ic ........FAIL! rc= 10
CLM tag used for the baseline comparison tests if applicable: clm3_7_10
Changes answers relative to baseline: no (b4b)
===============================================================
===============================================================
Tag name: clm3_7_10
Originator(s): erik (erik)
Date: Mon Mar 22 23:54:48 MDT 2010
One-line Summary: Fix drydep so that BMOZ case will work
Purpose of changes:
Update externals, fix drydep bug (so that BMOZ case will run bug 1132). Add 10x15 and 4x5
finidat files, so that bluefire.clm.auxtest PET and PST cases will work. Fix
documentation on transient CO2.
Bugs fixed (include bugzilla ID):
1132 (clm failure for BMOZ compset)
Known bugs (include bugzilla ID):
701 (svn keyword)
717 (archiving bug -- only archive 1000 files at a time)
722 (threading slow)
789 (1pt sims 2.5X slow)
794 (hist avg strange)
883 (aerosol deposition not from atm)
896 (T62 mode does not work)
920 (glacier_mec problems in mksurfdata)
935 (RTM warning NOT an error)
990 (CN transient blowup)
994 (finidat files on jaguar for pftdyn fail)
1017 (SCM mode can NOT restart)
1025 (SCM mode can NOT use a global finidat file)
1063 (Problem in restarts for CCSM spinup data)
1092 (Problems running in debug mode on dublin with datm8)
1124 (Reported energy for pftdyn grid-cell not right)
1125 (T85, qtr-degree and urban pt surface datasets)
1133 (missing deallocate)
1135 (miss smG45 test)
1136 (line length for NEE in histFlds)
1137 (qtr-deg fsurdat)
1139 (LAND and PFTS 1D vector averaging doesn't work)
1141 (CN spinup test)
1143 (Problems with mksurfdata and ifort)
1144 (Bug in ndeplintInterp.ncl in calculation of time axis)
1147 (mkgriddata can't straddle over Greenwich)
1153 (Problem with ndeplintInterp for historical case)
1157 (Problem with VOC interpolation in mksurfdata)
http://bugs.cgd.ucar.edu/
Describe any changes made to build system: None
Describe any changes made to the namelist: None
List any changes to the defaults for the boundary datasets:
New 10x15 and 4x5 finidat files so that transient cases will work at those resolutions
Describe any substantial timing or memory changes: None
Code reviewed by: self
List any svn externals directories updated (csm_share, mct, etc.): scripts, drv, datm, pio
Update to ccsm4_0_beta47 versions
scripts to scripts4_100322b
drv to drvseq3_1_20
datm to datm8_100225
pio to pio1_0_18
List all files eliminated: None
List all files added and what they do: None
List all existing files that have been modified, and describe the changes:
M models/lnd/clm/doc/UsersGuide/Makefile ---------- Fix conversion to xml
M models/lnd/clm/doc/UsersGuide/special_cases.xml - Fix transient CO2 doc
M models/lnd/clm/doc/UsersGuide/addco2_datm.buildnml.diff - Fix CO2 file
M models/lnd/clm/tools/mksurfdata/mksurfdata.pl --- Fix historical rcp value
M models/lnd/clm/tools/interpinic/runinit_ibm.csh - Fix so will run
M models/lnd/clm/bld/namelist_files/namelist_defaults_clm.xml - Add 10x15, 4x5
finidat files
M models/lnd/clm/src/main/clm_comp.F90 ------- check drydep_method
M models/lnd/clm/src/main/clmtypeInitMod.F90 - check drydep_method
M models/lnd/clm/src/main/clm_atmlnd.F90 ----- check drydep_method, don't pass
drydep stuff unless drydep_method is DD_XLND
Summary of testing:
bluefire/CCSM testing: All PASS except...
FAIL ERB.f09_g16.I1850SPINUPCN.bluefire
BFAIL ERB.f09_g16.I1850SPINUPCN.bluefire.generate.clm3_7_10
BFAIL ERB.f09_g16.I1850SPINUPCN.bluefire.compare.clm3_7_07
CLM tag used for the baseline comparison tests if applicable: clm3_7_09
Changes answers relative to baseline: No bit-for-bit
===============================================================
===============================================================
Tag name: clm3_7_09
Originator(s): erik (erik)
Date: Sun Mar 21 21:08:54 MDT 2010
One-line Summary: Fix snow enthalpy bug, cndv datasets, various fixes
Purpose of changes:
Fix snow enthalpy bug from Dave Lawrence. Add rcp to mksurfdata.pl. Add new 2006 datasets
for pftdyn files for mksurfdata. Fix history bug. New rcp 8.5 1-degree pftdyn dataset.
Duplicate all cn datasets for cndv. pergro use cases output in double precision. Some
work on documentation.
Bugs fixed (include bugzilla ID):
1128 (cndv needs the same input files as cn)
1130 (History problem on restarts)
1131 (pergro use cases need double output files)
Known bugs (include bugzilla ID):
701 (svn keyword)
717 (archiving bug -- only archive 1000 files at a time)
722 (threading slow)
789 (1pt sims 2.5X slow)
794 (hist avg strange)
883 (aerosol deposition not from atm)
896 (T62 mode does not work)
920 (glacier_mec problems in mksurfdata)
935 (RTM warning NOT an error)
990 (CN transient blowup)
994 (finidat files on jaguar for pftdyn fail)
1017 (SCM mode can NOT restart)
1025 (SCM mode can NOT use a global finidat file)
1063 (Problem in restarts for CCSM spinup data)
1092 (Problems running in debug mode on dublin with datm8)
1124 (Reported energy for pftdyn grid-cell not right)
1125 (T85, qtr-degree and urban pt surface datasets)
1132 (clm failure for BMOZ compset)
1133 (missing deallocate)
1135 (miss smG45 test)
1136 (line length for NEE in histFlds)
1137 (qtr-deg fsurdat)
1139 (LAND and PFTS 1D vector averaging doesn't work)
1141 (CN spinup test)
1143 (Problems with mksurfdata and ifort)
1144 (Bug in ndeplintInterp.ncl in calculation of time axis)
1147 (mkgriddata can't straddle over Greenwich)
1153 (Problem with ndeplintInterp for historical case)
1157 (Problem with VOC interpolation in mksurfdata)
http://bugs.cgd.ucar.edu/
Describe any changes made to build system: None
Describe any changes made to the namelist: None
List any changes to the defaults for the boundary datasets:
New 1-degree rcp=8.5 pftdyn dataset with harvest for 2006
Duplicate cn datasets for cndv
Describe any substantial timing or memory changes: None
Code reviewed by: self
snow changes come from dlawren and also reviewed by oleson
List any svn externals directories updated (csm_share, mct, etc.): None
List all files eliminated: None
List all files added and what they do:
>>>>>>>>>>> Add AIM rcp datasets
A models/lnd/clm/tools/mksurfdata/pftdyn_rcp6.0_simyr1850-2100.txt
List all existing files that have been modified, and describe the changes:
>>>>>>>>>>> New 2006 file
M models/lnd/clm/tools/mksurfdata/pftdyn_rcp2.6_simyr1850-2100.txt - New 2006 file
M models/lnd/clm/tools/mksurfdata/pftdyn_rcp4.5_simyr1850-2100.txt - New 2006 file
M models/lnd/clm/tools/mksurfdata/pftdyn_rcp8.5_simyr1850-2100.txt - New 2006 file
M models/lnd/clm/tools/mksurfdata/mksurfdata.pl - Add rcp as argument
M models/lnd/clm/tools/mksurfdata/README -------- Document mksurfdata.pl and rcp files
M models/lnd/clm/tools/ncl_scripts/getregional_datasets.pl - Get rid of old masks
M models/lnd/clm/tools/interpinic/runinit_ibm.csh - Get rid of old masks/grids, and sim_year
M models/lnd/clm/tools/interpinic/README ---------- Update documentation
M models/lnd/clm/tools/mkgriddata/mkgriddata.ccsm_dom - Add clm grid file
M models/lnd/clm/tools/mkgriddata/README ------------- More documentation
M models/lnd/clm/bld/namelist_files/use_cases/pergro.xml ------ Output history in double