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1. EdwardsLab EdwardsLab Public

   Code from the Edwards lab, including bioinformatics, image analysis and more. All this code is created and maintained by folks at Rob Edwards' bioinformatics lab at Flinders University

   Jupyter Notebook 40 15

2. ComputationalGenomicsManual ComputationalGenomicsManual Public

   Robs manual for the computational genomics and bioinformatics class.

   HTML 255 66

3. PhiSpy PhiSpy Public

   Prediction of prophages from bacterial genomes

   Jupyter Notebook 78 21

4. PhispyAnalysis PhispyAnalysis Public

   Analysis of phispy data

   Jupyter Notebook 4 2

5. sphae sphae Public

   Phage annotations and predictions. A spae is a prediction or foretelling. We'll foretell you what your phage is doing!

   Python 33 9

6. atavide_lite atavide_lite Public

   A simpler version of atavide that relies only on slurm or PBS scripts. Some of the settings are specific for our compute resources

   Python 3 2