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Commits on Apr 23, 2016

• Merge branch 'master' of https://github.com/bioinform/longislnd

  bayolau

  committed
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• P6 CHM1 example

  bayolau

  committed
  dbddb92

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Commits on Apr 22, 2016

• polish convinient script

  bayolau

  committed
  3c75b74

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Commits on Apr 19, 2016

• increase example flank

  bayolau

  committed
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• Merge pull request #8 from bioinform/readme

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  bayolau

  committed
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• drafted README.md

  bayolau

  committed
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Commits on Apr 17, 2016

• Merge pull request #9 from bioinform/fq

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  bayolau

  committed
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• expose fastq writer

  bayolau

  committed
  007ba06

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• learn and simulate

  bayolau

  committed
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• remove custom jvm opts

  bayolau

  committed
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Commits on Apr 16, 2016

• example of downloading and aligning data

  bayolau

  committed
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• changed default parameters

  bayolau

  committed
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• moved old script

  bayolau

  committed
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• alignment example

  bayolau

  committed
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• Create LICENSE.md

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  bayolau

  committed
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• Merge pull request #7 from bioinform/runinfo

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  bayolau

  committed
  cdf7d29

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• estimate accuracy

  bayolau

  committed
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Commits on Apr 14, 2016

• also extracts RunCode

  bayolau

  committed
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Commits on Apr 13, 2016

• error handling

  bayolau

  committed
  953c7b8

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• added jvm options

  bayolau

  committed
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Commits on Apr 12, 2016

• better sampling script

  bayolau

  committed
  86eaf0b

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• use the sampled runinfo

  bayolau

  committed
  a88ed84

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• also sample RunInfo

  bayolau

  committed
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Commits on Apr 11, 2016

• ignore jar

  bayolau

  committed
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Commits on Apr 8, 2016

• Merge pull request #6 from bioinform/mt

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  bayolau

  committed
  718d2f7

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• removed duplicated line

  bayolau

  committed
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• also set seed for thread local generator

  bayolau

  committed
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Commits on Mar 29, 2016

• fixed carry-over

  bayolau

  committed
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Commits on Mar 25, 2016

• multithreading

  bayolau

  committed
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Commits on Mar 23, 2016

• Merge pull request #5 from bioinform/len_improvement

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  bayolau

  committed
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• shift zm flag appropiately

  bayolau

  committed
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• Merge pull request #4 from bioinform/cleanup

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  bayolau

  committed
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• Merge remote-tracking branch 'remotes/origin/cleanup' into len_improvement

  bayolau

  committed
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Commits on Mar 17, 2016

• switch to using ordinal

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  committed
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Commits on Mar 16, 2016

• refactor

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  committed
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