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@ldgh

Lab. de Diversidade Genética Humana (LDGH)

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  1. NAToRA_Public NAToRA_Public Public

    NAToRA toolkit consists of a series of scripts to execute kinship control analyses as described in the manuscript by Leal et al. 2022, entitled "NAToRA, a relatedness-pruning method to minimize the…

    Python 6 1

  2. Genotype-Imputation-public Genotype-Imputation-public Public

    Public description of LDGH Genotype Imputation v.2. pipeline developed in Phyton by Thiago Peixoto Leal, with the collaboration by Nathalia M. Araujo, Marilia Scliar and Ricardo Lyra. The user may …

    2 1

  3. Targeted_Sequencing_Pipeline Targeted_Sequencing_Pipeline Public

    Perl

  4. Genotype_Correction Genotype_Correction Public

    Python

  5. Population-Structure Population-Structure Public

    Population Structure scripts

    Python

  6. MosaiQC-public MosaiQC-public Public template

    SmartCleaning (now called MosaiQC) is a script developed by Thiago Peixoto Leal to clean and perform QC of genotyping array data using PLINK. It automates the different steps. If interested in usin…

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