diff --git a/vcfindex.c b/vcfindex.c index b2d57cc91..56c2d858f 100644 --- a/vcfindex.c +++ b/vcfindex.c @@ -146,7 +146,7 @@ int main_vcfindex(int argc, char *argv[]) case 'c': tbi = 0; break; case 't': tbi = 1; min_shift = 0; break; case 'f': force = 1; break; - case 'm': + case 'm': min_shift = strtol(optarg,&tmp,10); if ( *tmp ) error("Could not parse argument: --min-shift %s\n", optarg); break; @@ -217,7 +217,7 @@ int main_vcfindex(int argc, char *argv[]) else if (ret == -3) error("index: \"%s\" is in a format that cannot be usefully indexed\n", fname); else - error("index: \"%s\" is corrupted or unsorted\n", fname); + error("index: failed to create index for \"%s\"\n", fname); } return 0; }