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Commits on Apr 25, 2025

• Merge pull request #5 from labgem/dev

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  JeanMainguy

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Commits on Apr 18, 2025

• keep only ids in proteins list when also found in genome id as they are likely protein ids

  JeanMainguy

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• Update netsyn/netsyn_getINSDCFiles.py

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• bump to version 1.0.0

  JeanMainguy

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• Improve installation section of the Readme

  JeanMainguy

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Commits on Apr 17, 2025

• remove getNucleicFileName call and add comment to explain why

  JeanMainguy

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• improve http request error management

  JeanMainguy

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• remove forgotten debug print

  JeanMainguy

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• comment alpha index for planar graph

  JeanMainguy

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• use alpha index for non planar graph

  JeanMainguy

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• out alpha index computed with planar and non planar formula

  JeanMainguy

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• use alpha index formula for non planar graph

  JeanMainguy

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• fix html path export

  JeanMainguy

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• display sorted cluster on size

  JeanMainguy

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• fix left table when metadata is selected

  JeanMainguy

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• fixing loop

  JeanMainguy

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• fix typo in run fct of netsyn_dataExport

  JeanMainguy

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• add alpha index to the netsyn app

  JeanMainguy

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• add cluster size in html legend

  JeanMainguy

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• change nx fct to get adjency matrix to feed mcl to prevent numpy error

  JeanMainguy

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• modification in order to get genbank file instead of embl file

  

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  JeanMainguy

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Commits on Jan 24, 2024

• Merge pull request #4 from labgem/JeanMainguy-patch-1

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  JeanMainguy

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• Update netsyn version to the expected one

  JeanMainguy

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Commits on Feb 14, 2023

• Merge pull request #3 from labgem/dev

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Commits on Feb 13, 2023

• use networkx to write final graph to graphML #1

  JeanMainguy

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• update readme with bioconda install

  JeanMainguy

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Commits on Feb 9, 2023

• add requests and fix minimal version for networkx

  JeanMainguy

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Commits on Sep 7, 2022

• Merge pull request #2 from szhorvat/patch-1

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• README: update igraph installation instructions

  szhorvat

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Commits on Aug 31, 2022

• README modification

  baudstam

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• README modification (use python 3.8 insted of python3.7 and networkx 2.8 instead of network 2.6)

  baudstam

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Commits on Jul 28, 2022

• Modification uniprot query and correct bug in partial graph

  baudstam

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Commits on Jun 14, 2022

• correcting bug described into issue 1. Tested with the users data and get results

  baudstam

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Commits on Jun 13, 2022

• modifie the index into the crossreference dictionnary line 206

  baudstam

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Commits on Jun 10, 2022

• correcting bug in netsyn_getINSDCFiles.py. See issue 1

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