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murmur3
CI #1956: Commit 532fdf8 pushed by marcelm
December 25, 2024 17:47 1m 0s murmur
December 25, 2024 17:47 1m 0s
Non-canonical syncmers and randstrobes
CI #1955: Pull request #474 synchronize by marcelm
December 20, 2024 19:44 4s noncanonical2
December 20, 2024 19:44 4s
Gather NAMs into a single vector
CI #1954: Commit 0625b1c pushed by marcelm
December 20, 2024 19:44 1m 27s noncanonical2
December 20, 2024 19:44 1m 27s
Merge pull request #464 from ksahlin/syncmers
CI #1953: Commit bff84e9 pushed by marcelm
December 20, 2024 09:31 1m 59s main
December 20, 2024 09:31 1m 59s
Avoid repetitive syncmers
CI #1952: Pull request #475 opened by marcelm
December 20, 2024 09:31 5s syncmers2
December 20, 2024 09:31 5s
Ignore repetitive k-mers
CI #1951: Commit bb384f8 pushed by marcelm
December 20, 2024 09:18 1m 24s syncmers2
December 20, 2024 09:18 1m 24s
Produce a syncmer if any minimum is at the required position
CI #1950: Pull request #464 synchronize by marcelm
December 20, 2024 09:18 4s syncmers
December 20, 2024 09:18 4s
Test: SyncmerIterator returns canonical syncmers
CI #1949: Commit 97fb900 pushed by marcelm
December 20, 2024 09:18 7m 5s syncmers
December 20, 2024 09:18 7m 5s
Produce a syncmer if any minimum is at the required position
CI #1948: Pull request #464 synchronize by marcelm
December 19, 2024 20:10 5s syncmers
December 19, 2024 20:10 5s
Ignore repetitive k-mers
CI #1947: Commit bb384f8 pushed by marcelm
December 19, 2024 20:10 1m 31s syncmers
December 19, 2024 20:10 1m 31s
Non-canonical syncmers and randstrobes
CI #1946: Pull request #474 opened by marcelm
December 19, 2024 16:06 5s noncanonical2
December 19, 2024 16:06 5s
Merge pull request #473 from ksahlin/skip-unaligned
CI #1945: Commit 5a7de44 pushed by marcelm
December 18, 2024 14:47 3m 28s main
December 18, 2024 14:47 3m 28s
Gather NAMs into a single vector
CI #1944: Commit 3e1557b pushed by marcelm
December 18, 2024 08:46 2m 9s noncanonical2
December 18, 2024 08:46 2m 9s
Skip alignments that are actually not aligned
CI #1943: Pull request #473 opened by marcelm
December 17, 2024 19:40 4s skip-unaligned
December 17, 2024 19:40 4s
Update baseline commit
CI #1942: Commit 28b6b72 pushed by marcelm
December 17, 2024 19:38 2m 57s skip-unaligned
December 17, 2024 19:38 2m 57s
Fix failing assertion when aligning single-end reads
CI #1941: Commit 4685bf8 pushed by marcelm
December 17, 2024 19:33 1m 59s skip-unaligned
December 17, 2024 19:33 1m 59s
Test baseline comparison even in single-end mode
CI #1940: Commit 9089f4d pushed by marcelm
December 17, 2024 19:08 2m 32s baseline-se
December 17, 2024 19:08 2m 32s
Test baseline comparison even in single-end mode
CI #1939: Commit 8056555 pushed by marcelm
December 17, 2024 17:11 1m 1s baseline-se
December 17, 2024 17:11 1m 1s
Choose base syncmer differently
CI #1938: Pull request #472 opened by marcelm
December 17, 2024 11:15 6s base-hash
December 17, 2024 11:15 6s
Choose base syncmer by XORing the two hashes together
CI #1937: Commit 0636713 pushed by marcelm
December 17, 2024 10:42 1m 11s base-hash
December 17, 2024 10:42 1m 11s
Merge pull request #471 from ksahlin/contig-names
CI #1936: Commit c0307b6 pushed by marcelm
December 17, 2024 10:21 1m 17s main
December 17, 2024 10:21 1m 17s
Use XOR
CI #1935: Commit 6a0c779 pushed by marcelm
December 16, 2024 21:46 1m 2s xor
xor
December 16, 2024 21:46 1m 2s
Pick odd hash as main
CI #1934: Commit d586c54 pushed by marcelm
December 16, 2024 20:56 1m 10s base-hash
December 16, 2024 20:56 1m 10s
Be less strict when verifying contig identifiers
CI #1933: Pull request #471 opened by marcelm
December 16, 2024 20:03 4s contig-names
December 16, 2024 20:03 4s
Be less strict when verifying contig identifiers
CI #1932: Commit 4f94ddb pushed by marcelm
December 16, 2024 20:02 1m 8s contig-names
December 16, 2024 20:02 1m 8s