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Peteramati

Peteramati is a Web system for collecting, evaluating, and grading student programming assignments. It collects student assignments using Git. Student assignment code runs in Linux containers, segregated from the main machine. Students can run test code themselves.

Peteramati is named after Peter Amati, one of my most important teachers. Mr. Amati taught AP biology at Holliston High School, Holliston, Massachusetts. In the classroom, he was exacting, passionate, warm, inspirational, and fun as hell. -Eddie Kohler

Configuration

Peteramati is configured primarily through the psets.json file. See doc/psetsjson.md for more information.

Installation

  1. Run lib/createdb.sh to create the database. Use lib/createdb.sh OPTIONS to pass options to MariaDB, such as --user and --password. Many MariaDB installations require privilege to create tables, so you may need sudo lib/createdb.sh OPTIONS. Run lib/createdb.sh --help for more information. You will need to decide on a name for your database (no spaces allowed).

  2. Edit the conf/options.php file with information about your class. The username and password information for the conference database is stored here.

  3. Configure your web server so that all accesses to the Peteramati site are handled by its index.php script. The right way to do this depends on which server you’re running; we recommend Nginx with php-fpm.

    The example configurations below make SITE/testclass point to a Peteramati installation in /home/kohler/peteramati.

    Nginx: Configure Nginx to redirect all Peteramati accesses to php-fpm. This example code would go in a server block, and assumes that php-fpm is listening on port 9000:

    location /testclass/ {
        fastcgi_pass 127.0.0.1:9000;
        fastcgi_split_path_info ^(/testclass)(/.*)$;
        fastcgi_param SCRIPT_FILENAME /home/kohler/peteramati/index.php;
        include fastcgi_params;
    }
    

    You may also set up separate location blocks so that Nginx directly serves static files under /testclass/images/, /testclass/scripts/, and /testclass/stylesheets/.

    Apache with mod_proxy and php-fpm: Add a ProxyPass for the Peteramati script.

    ProxyPass "/testclass" "fcgi://localhost:9000/home/kohler/peteramati/index.php"
    

    Apache with mod_php (not recommended): Add a ScriptAlias for the Peteramati script and a <Directory> for the installation.

    ScriptAlias "/testclass" "/home/kohler/peteramati/index.php"
    <Directory "/home/kohler/peteramati">
      Options None
      AllowOverride none
      Require all denied
      <Files "index.php">
        Require all granted
      </Files>
    </Directory>
    

    General notes: Everything under Peteramati’s site path (here, /testclass) should be served by Peteramati. This normally happens automatically. However, if the site path is /, you may need to turn off your server’s default handlers for subdirectories such as /doc.

    The images, scripts, and stylesheets subdirectories contain static files that any user may access. It is safe to configure your server to serve those directories directly, without involving the Peteramati script.

  4. Build the pa-jail program and other helper programs.

    cd jail && make

    The pa-jail program must be set-uid/gid root, so you may need to build it using sudo make.

  5. Configure a GitHub OAuth app. Peteramati assumes you’re using GitHub to collect user information.

    • Create a new OAuth app on your organization’s Settings page. Set the callback URL to a prefix of the URL where your application will live; for instance, an application living at https://cs61.seas.harvard.edu/grade/cs61-2019/ might have that callback URL, or callback URL https://cs61.seas.harvard.edu/.

    • Edit conf/options.php to set $Opt["githubOAuthClientId"] and $Opt["githubOAuthClientSecret"] to the app’s Client ID and Client Secret, respectively. These values are strings.

  6. Create the first user on the site.

    $ lib/runsql.sh --create-user email@example.com firstName=First lastName=Last roles=2

    The roles parameter controls the user's privileges; students are 0, TF/TAs are 1, and the instructor privileges are 2.

  7. Log in to the site. Now obtain a GitHub OAuth token, either by visiting SITE/authorize, or by configuring a personal access token and setting $Opt["githubOAuthToken"] explicitly in conf/options.php.

  8. Configure the jail. The instructions below describe a simple setup, in which each student jail contains an actual copy of the files included in the jail. This can use substantial amounts of disk space for a large class; if this is a problem, you may want to configure a skeleton directory.

    • Create the directory where your jails will be, such as /jails. Now, create file /etc/pa-jail.conf, and in it, add a line saying enablejail /jails/*.

    • See doc/runners.md for more information about the jail layout.

  9. Now configure the jail contents, which are defined by a manifest that contains a list of files to be copied into each jail when it is created. In the following, we will call this file jfiles.txt. You'll probably want to create it in the same place where you store your psets.json configuration file (see below); this location must be accessible to the web server.

  10. Create a user under whose identity the jails run, such as jail61user. You can use your distribution's user add functionality (e.g., adduser or useradd commands) for this, but ensure to set no password for the user (it never needs to log in).

  11. Now create your pset configuration file, psets.json. For content, see the examples and the schema.

    In this file, make sure to add the following entries (usually under _defaults):

    • run_dirpattern, which specifies where jails are. The format is something like "/jails/repo${REPOID}.pset${PSET}", with REPOID and PSET set automatically by Peteramati.
    • run_jailfiles, which points to the jfiles.txt file created earlier.
    • run_username, which you should set to the name of the jail user created earlier (e.g., jail61user),
  12. Populate the jfiles.txt manifest with the files needed to run student code. To do so, use the pa-trace command in the jail/ subdirectory of your Peteramati installation.

    For example, the following command adds all files required to run /bin/ls inside the jail:

    ./pa-trace -o /home/kohler/class/cs61/jfiles.txt -x /jails /bin/ls

    The -x argument tells pa-trace to avoid including files inside the /jails directory in the list in jfiles.txt.

  13. Your Peteramati installation is now ready for use!

License

Peteramati is distributed under the GNU General Public License, version 2.0 (GPLv2). See LICENSE for a copy of this license.

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