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AMReX_StateData.H
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#ifndef AMREX_StateData_H_
#define AMREX_StateData_H_
#include <AMReX_Config.H>
#include <AMReX_Box.H>
#include <AMReX_BoxArray.H>
#include <AMReX_MultiFab.H>
#include <AMReX_MFCopyDescriptor.H>
#include <AMReX_BCRec.H>
#include <AMReX_Array.H>
#include <AMReX_Vector.H>
#include <AMReX_VisMF.H>
#include <AMReX_DistributionMapping.H>
#include <AMReX_PhysBCFunct.H>
#include <AMReX_Geometry.H>
#include <AMReX_RealBox.H>
#include <AMReX_StateDescriptor.H>
#include <memory>
namespace amrex {
class StateDataPhysBCFunct;
/**
* \brief Current and previous level-time data.
*
* StateData holds state data on a level for the current and previous time step.
*/
class StateData
{
friend class StateDataPhysBCFunct;
public:
/**
* \brief The default constructor.
*/
StateData ();
/**
* \brief Constructor that properly initializes data members.
*
* \param p_domain
* \param grds
* \param dm
* \param d
* \param cur_time
* \param dt
* \param factory
*/
StateData (const Box& p_domain,
const BoxArray& grds,
const DistributionMapping& dm,
const StateDescriptor* d,
Real cur_time,
Real dt,
const FabFactory<FArrayBox>& factory);
/**
* \brief The destructor.
*/
~StateData ();
StateData (StateData&& rhs) noexcept;
StateData (StateData const& rhs) = delete;
void operator= (StateData && rhs) = delete;
void operator= (StateData const& rhs);
/**
* \brief Initializes data members if you used default constructor.
*
* \param p_domain
* \param grds
* \param dm
* \param d
* \param cur_time
* \param dt
* \param factory
*/
void define (const Box& p_domain,
const BoxArray& grds,
const DistributionMapping& dm,
const StateDescriptor& d,
Real cur_time,
Real dt,
const FabFactory<FArrayBox>& factory);
/**
* \brief Copies old data from another StateData object and sets the same time level.
* If old data is uninitialized, allocates it with same properties as the input data.
*
* \param state
*/
void copyOld (const StateData& state);
/**
* \brief Copies new data from another StateData object and sets the same time level.
* If new data is uninitialized, allocates it with the same properties as the input data.
*
* \param state
*/
void copyNew (const StateData& state);
/**
* \brief Allocates space for old timestep data.
*/
void allocOldData ();
/**
* \brief Deletes the space used by the old timestep data.
*/
void removeOldData () { old_data.reset(); }
/**
* \brief Reverts back to initial state.
*/
void reset ();
/**
* \brief Old data becomes new data and new time is incremented by dt.
*
* \param dt
*/
void swapTimeLevels (Real dt);
/**
* \brief Swaps old data with a new MultiFab.
* Deletes the previous old data.
*
* \param mf
*/
void replaceOldData ( MultiFab&& mf );
/**
* \brief Swaps old data with another StateData.
* Does not delete the previous old data.
*
* \param s
*/
void replaceOldData ( StateData& s );
/**
* \brief Swaps new data with a new MultiFab.
* Deletes the previous new data.
*
* \param mf
*/
void replaceNewData ( MultiFab&& mf );
/**
* \brief Swaps new data with another StateData.
* Does not delete the previous new data.
*
* \param s
*/
void replaceNewData ( StateData& s );
/**
* \brief Sets time of old and new data.
*
* \param t_new
* \param dt_old
* \param dt_new
*/
void setTimeLevel (Real t_new,
Real dt_old,
Real dt_new);
/**
* \brief Sets time of old data.
*
* \param t_old
*/
void setOldTimeLevel (Real t_old);
/**
* \brief Sets time of new data.
*
* \param t_new
*/
void setNewTimeLevel (Real t_new);
void syncNewTimeLevel (Real t_new);
void RegisterData (MultiFabCopyDescriptor& multiFabCopyDesc,
Vector<MultiFabId>& mfid);
void InterpAddBox (MultiFabCopyDescriptor& multiFabCopyDesc,
Vector<MultiFabId>& mfid,
BoxList* returnedUnfillableBoxes,
Vector<FillBoxId>& returnedFillBoxIds,
const Box& subbox,
Real time,
int src_comp,
int dest_comp,
int num_comp,
bool extrap = false);
void InterpFillFab (MultiFabCopyDescriptor& fabCopyDesc,
const Vector<MultiFabId>& mfid,
const Vector<FillBoxId>& fillBoxIds,
FArrayBox& dest,
Real time,
int src_comp,
int dest_comp,
int num_comp,
bool extrap = false);
/**
* \brief Set physical bndry values
*
* \param dest
* \param time
* \param dx
* \param prob_domain
* \param dest_comp
* \param src_comp
* \param num_comp
*/
void FillBoundary (FArrayBox& dest,
Real time,
const Real* dx,
const RealBox& prob_domain,
int dest_comp,
int src_comp,
int num_comp = 1);
void FillBoundary (Box const& bx,
FArrayBox& dest,
Real time,
Geometry const& geom,
int dest_comp,
int src_comp,
int num_comp);
/**
* \brief Write the state data to a checkpoint file.
*
* \param name
* \param fullpathname
* \param os
* \param how
* \param dump_old
*/
void checkPoint (const std::string& name,
const std::string& fullpathname,
std::ostream& os,
VisMF::How how,
bool dump_old = true);
/**
* \brief Restart with domain box, grids, and dmap provided
*
* \param is
* \param p_domain
* \param grds
* \param dm
* \param factroy
* \param d
* \param restart_file
*/
void restart (std::istream& is,
const Box& p_domain,
const BoxArray& grds,
const DistributionMapping& dm,
const FabFactory<FArrayBox>& factroy,
const StateDescriptor& d,
const std::string& restart_file);
/**
* \brief or from another similar state
*
* \param d
* \param rhs
*/
void restart (const StateDescriptor& d,
const StateData& rhs);
/**
* \brief Returns the StateDescriptor.
*/
const StateDescriptor* descriptor () const noexcept { return desc; }
/**
* \brief Returns the valid domain.
*/
const Box& getDomain () const noexcept { return domain; }
/**
* \brief Returns the BoxArray.
*/
const BoxArray& boxArray () const noexcept { return grids; }
const DistributionMapping& DistributionMap () const noexcept { return dmap; }
/**
*
* \param new_dmap
*/
void setDistributionMap ( DistributionMapping& new_dmap ) noexcept { dmap = new_dmap; }
const FabFactory<FArrayBox>& Factory () const noexcept { return *m_factory; }
/**
* \brief Returns the current time.
*/
Real curTime () const noexcept {
return (desc->timeType() == StateDescriptor::Point) ?
new_time.stop : 0.5_rt*(new_time.start + new_time.stop);
}
/**
* \brief Returns the previous time.
*/
Real prevTime () const noexcept {
return (desc->timeType() == StateDescriptor::Point) ?
old_time.stop : 0.5_rt*(old_time.start + old_time.stop);
}
/**
* \brief Returns the new data.
*/
MultiFab& newData () noexcept { BL_ASSERT(new_data != nullptr); return *new_data; }
/**
* \brief Returns the new data.
*/
const MultiFab& newData () const noexcept { BL_ASSERT(new_data != nullptr); return *new_data; }
/**
* \brief Returns the old data.
*/
MultiFab& oldData () noexcept { BL_ASSERT(old_data != nullptr); return *old_data; }
/**
* \brief Returns the old data.
*/
const MultiFab& oldData () const noexcept { BL_ASSERT(old_data != nullptr); return *old_data; }
/**
* \brief Returns the FAB of new data at grid index `i'.
*
* \param i
*/
FArrayBox& newGrid (int i) noexcept { BL_ASSERT(new_data != nullptr); return (*new_data)[i]; }
/**
* \brief Returns the FAB of old data at grid index `i'.
*
* \param i
*/
FArrayBox& oldGrid (int i) noexcept { BL_ASSERT(old_data != nullptr); return (*old_data)[i]; }
/**
* \brief Returns boundary conditions of specified component on the specified grid.
*
* \param comp
* \param i
*/
BCRec getBC (int comp, int i) const noexcept;
/**
* \brief Prints out the time interval.
*
* \param os
*/
void printTimeInterval (std::ostream& os) const;
/**
* \brief True if there is any old data available.
*/
bool hasOldData () const noexcept { return old_data != nullptr; }
/**
* \brief True if there is any new data available.
*/
bool hasNewData () const noexcept { return new_data != nullptr; }
void getData (Vector<MultiFab*>& data,
Vector<Real>& datatime,
Real time) const;
/**
* \brief Get the Arena used.
*/
Arena* getArena () const noexcept { return arena; }
/**
* \brief Set the Arena used.
*/
void setArena (Arena* ar) noexcept { arena = ar; }
/**
* \brief These facilitate prereading FabArray headers to avoid
* synchronization when reading multiple FabArrays
*/
static const Vector<std::string> &FabArrayHeaderNames() { return fabArrayHeaderNames; }
static void ClearFabArrayHeaderNames() { fabArrayHeaderNames.clear(); }
static void SetFAHeaderMapPtr(std::map<std::string, Vector<char> > *fahmp) { faHeaderMap = fahmp; }
private:
std::unique_ptr<FabFactory<FArrayBox> > m_factory;
struct TimeInterval
{
Real start;
Real stop;
};
//! Pointer to data descriptor.
const StateDescriptor* desc;
//! Problem domain.
Box domain;
//! Grids defined at this level.
BoxArray grids;
//
DistributionMapping dmap;
//! Time variable assoc with new data.
TimeInterval new_time;
//! Time variable assoc with old data.
TimeInterval old_time;
//! Pointer to new-time data.
std::unique_ptr<MultiFab> new_data;
//! Pointer to previous time data.
std::unique_ptr<MultiFab> old_data;
//! Arena we should use for allocating the data.
Arena* arena;
/**
* \brief This is used as a temporary collection of FabArray header
* names written during a checkpoint
*/
static Vector<std::string> fabArrayHeaderNames;
//! This is used to store preread FabArray headers
static std::map<std::string, Vector<char> > *faHeaderMap; // ---- [faheader name, the header]
void restartDoit (std::istream& is, const std::string& restart_file);
};
class StateDataPhysBCFunct
{
public:
StateDataPhysBCFunct (StateData& sd, int sc, const Geometry& geom_);
void operator() (MultiFab& mf, int dcomp, int ncomp, IntVect const& nghost,
Real time, int bccomp);
void FillBoundary (MultiFab& mf, int dcomp, int ncomp, IntVect const& nghost,
Real time, int bccomp) {
this->operator()(mf,dcomp,ncomp,nghost,time,bccomp);
}
private:
StateData* statedata;
int src_comp;
const Geometry& geom;
};
}
#endif /*_StateData_H_*/