DESCRIPTION

Package: phylopomp
Type: Package
Title: Phylodynamic Inference for POMP Models
Version: 0.14.9.1
Date: 2024-12-02
Authors@R: c(person(given=c("Aaron","A."),family="King",role=c("aut","cre"),email="kingaa@umich.edu",comment=c(ORCID="0000-0001-6159-3207")),
	  person(given=c("Qianying"),family="Lin",role=c("aut"),comment=c(ORCID="0000-0001-8620-9910"))
	  )
Description: Tools for phylodynamic analysis.
biocViews:
Depends: R(>= 4.3)
Imports: grid, ggtree, yaml, ggplot2, scales, ape, dplyr, tibble, foreach, tidyr, pomp(>= 5.9.1.0), cowplot
LinkingTo: pomp
Suggests: tidyverse, doFuture, broom
License: GPL-3
LazyData: true
Contact: kingaa at umich dot edu
Encoding: UTF-8
Roxygen: list(roclets = c("collate", "namespace", "rd"))
RoxygenNote: 7.3.2
Collate: 
    'package.R'
    'geneal.R'
    'getinfo.R'
    'curtail.R'
    'diagram.R'
    'foreach.R'
    'gendat.R'
    'lbdp.R'
    'lbdp_exact.R'
    'lbdp_pomp.R'
    'lineages.R'
    'moran.R'
    'moran_exact.R'
    'newick.R'
    'parse.R'
    'pomp.R'
    'print.R'
    's2i2r2.R'
    'seir.R'
    'sir.R'
    'seir_pomp.R'
    'si2r.R'
    'siir.R'
    'simulate.R'
    'sir_pomp.R'
    'treeplot.R'
    'twospecies.R'
    'twospecies_pomp.R'
    'yaml.R'