Merge pull request #235 from kayjan/add-polars

Add polars

Author: kayjan

.github/workflows/codecov.yml

@@ -26,7 +26,7 @@ jobs:
           echo $CONDA/bin >> $GITHUB_PATH
       - name: Install dependencies
         run: |
-          python -m pip install pandas pydot Pillow
+          python -m pip install ".[all]"
       - name: Generate coverage report and benchmark report
         run: |
           python -m pip install pytest pytest-cov pytest-benchmark[histogram]

.github/workflows/pytest.yml

@@ -12,7 +12,7 @@ jobs:
     runs-on: ubuntu-latest
     strategy:
       matrix:
-        python-version: ["3.7", "3.8", "3.9", "3.10", "3.11", "3.12"]
+        python-version: ["3.8", "3.9", "3.10", "3.11", "3.12"]
       fail-fast: false
     steps:
       - uses: actions/checkout@v3
@@ -26,7 +26,7 @@ jobs:
           echo "Python version $python_version"
       - name: Install dependencies
         run: |
-          python -m pip install pandas pydot Pillow
+          python -m pip install ".[all]"
       - name: Lint with flake8
         run: |
           python -m pip install flake8

CHANGELOG.md

@@ -5,6 +5,12 @@ The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/),
 and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
 
 ## [Unreleased]
+
+## [0.18.0] - 2024-05-28
+### Added:
+- Tree Constructor: Polars method `polars_to_tree`, `polars_to_tree_by_relation`, `add_polars_to_tree_by_path`,
+and `add_polars_to_tree_by_name`.
+- Tree Exporter: Polars method `tree_to_polars`.
 ### Fixed:
 - Misc: Documentation to update mkdocs-material version for social plugin.
 - Misc: Update links in README.
@@ -560,7 +566,8 @@ ignore null attribute columns.
 - Utility Iterator: Tree traversal methods.
 - Workflow To Do App: Tree use case with to-do list implementation.
 
-[Unreleased]: https://github.com/kayjan/bigtree/compare/0.17.2...HEAD
+[Unreleased]: https://github.com/kayjan/bigtree/compare/0.18.0...HEAD
+[0.18.0]: https://github.com/kayjan/bigtree/compare/0.17.2...0.18.0
 [0.17.2]: https://github.com/kayjan/bigtree/compare/0.17.1...0.17.2
 [0.17.1]: https://github.com/kayjan/bigtree/compare/0.17.0...0.17.1
 [0.17.0]: https://github.com/kayjan/bigtree/compare/0.16.4...0.17.0

SECURITY.md

@@ -4,11 +4,9 @@
 
 The latest version of bigtree is supported with security updates.
 
-| Version | Supported          |
-|---------| ------------------ |
-| 0.12.x  | :white_check_mark: |
-| 0.13.x  | :white_check_mark: |
-| 0.14.x  | :white_check_mark: |
+| Version   | Supported          |
+|-----------| ------------------ |
+| >= 0.12.x | :white_check_mark: |
 
 
 ## Reporting a Vulnerability

assets/docs/tree_construct.png

@@ -1,4 +1,4 @@
-__version__ = "0.17.2"
+__version__ = "0.18.0"
 
 from bigtree.binarytree.construct import list_to_binarytree
 from bigtree.dag.construct import dataframe_to_dag, dict_to_dag, list_to_dag
@@ -13,13 +13,17 @@
     add_dict_to_tree_by_name,
     add_dict_to_tree_by_path,
     add_path_to_tree,
+    add_polars_to_tree_by_name,
+    add_polars_to_tree_by_path,
     dataframe_to_tree,
     dataframe_to_tree_by_relation,
     dict_to_tree,
     list_to_tree,
     list_to_tree_by_relation,
     nested_dict_to_tree,
     newick_to_tree,
+    polars_to_tree,
+    polars_to_tree_by_relation,
     str_to_tree,
 )
 from bigtree.tree.export import (
@@ -33,6 +37,7 @@
     tree_to_nested_dict,
     tree_to_newick,
     tree_to_pillow,
+    tree_to_polars,
     yield_tree,
 )
 from bigtree.tree.helper import clone_tree, get_subtree, get_tree_diff, prune_tree