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The template library files for protien function prediction by COACH and COFACTOR.<br>
<br>
<br>
<h1>TM-SITE library</h1>
<li type="disc"> <a href="download/COACH_lib/BPOCKET/pocket.tar.bz2">pocket.tar.bz2</a> (template binding pocket structure files)
<li type="disc"> <a href="download/COACH_lib/BPOCKET/BSITES.bsr">BSITES.bsr</a> (binding site residues)
<li type="disc"> <a href="download/COACH_lib/BPOCKET/BSITES.fasta">BSITES.fasta</a> (template fasta sequences)
<li type="disc"> <a href="download/COACH_lib/BPOCKET/BSITES.center">BSITES.center</a> (coordinates of binding pocket centers)
<br>
<br>
<h1>S-SITE library</h1>
<li type="disc"> <a href="download/COACH_lib/PSSM/PSSM.tar.bz2">PSSM.tar.bz2</a> (emplate sequence profiles with binding site information)
<li type="disc"> <a href="download/COACH_lib/PSSM/BSITES.bsr">BSITES.bsr</a> (binding site residues)
<li type="disc"> <a href="download/COACH_lib/PSSM/BSITES.fasta">BSITES.fasta</a> (template fasta sequences)
<li type="disc"> <a href="download/COACH_lib/PSSM/BSITES.fpt">BSITES.fpt</a> (template ligand fingerprints)
<br>
<br>
<h1>COFACTOR library</h1>
<li type="disc"> <a href="download/COACH_lib/COFACTOR/receptor.tar.bz2">receptor.tar.bz2</a> (receptor structure files)
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<li type="disc"> <a href="download/COACH_lib/COFACTOR/Enzyme.tar.bz2">Enzyme.tar.bz2</a> (EC library files)
<li type="disc"> <a href="download/COACH_lib/COFACTOR/GO.tar.bz2">GO.tar.bz2</a> (GO library files)
<li type="disc"> <a href="download/COACH_lib/COFACTOR/map.tar.bz2">map.tar.bz2</a> (the mapping between ligand-binding, EC and GO templates)
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Reference:
<br>
Jianyi Yang, Ambrish Roy, and Yang Zhang.
<i>BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions</i>, Nucleic Acids Research, 41: D1096-D1103 (2013) (<a href=/papers/2013_1.pdf>download the PDF file</a>).
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