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13 | 13 |
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14 | 14 | from histoprep import SlideReader
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15 | 15 |
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16 |
| -LOGO = """ |
17 |
| -██╗ ██╗██╗███████╗████████╗ ██████╗ ██████╗ ██████╗ ███████╗██████╗ |
18 |
| -██║ ██║██║██╔════╝╚══██╔══╝██╔═══██╗██╔══██╗██╔══██╗██╔════╝██╔══██╗ |
19 |
| -███████║██║███████╗ ██║ ██║ ██║██████╔╝██████╔╝█████╗ ██████╔╝ |
20 |
| -██╔══██║██║╚════██║ ██║ ██║ ██║██╔═══╝ ██╔══██╗██╔══╝ ██╔═══╝ |
21 |
| -██║ ██║██║███████║ ██║ ╚██████╔╝██║ ██║ ██║███████╗██║ |
22 |
| -╚═╝ ╚═╝╚═╝╚══════╝ ╚═╝ ╚═════╝ ╚═╝ ╚═╝ ╚═╝╚══════╝╚═╝ |
23 |
| - by jopo666 (2023) |
24 |
| -""" |
| 16 | +# LOGO = """ |
| 17 | +# ██╗ ██╗██╗███████╗████████╗ ██████╗ ██████╗ ██████╗ ███████╗██████╗ |
| 18 | +# ██║ ██║██║██╔════╝╚══██╔══╝██╔═══██╗██╔══██╗██╔══██╗██╔════╝██╔══██╗ |
| 19 | +# ███████║██║███████╗ ██║ ██║ ██║██████╔╝██████╔╝█████╗ ██████╔╝ |
| 20 | +# ██╔══██║██║╚════██║ ██║ ██║ ██║██╔═══╝ ██╔══██╗██╔══╝ ██╔═══╝ |
| 21 | +# ██║ ██║██║███████║ ██║ ╚██████╔╝██║ ██║ ██║███████╗██║ |
| 22 | +# ╚═╝ ╚═╝╚═╝╚══════╝ ╚═╝ ╚═════╝ ╚═╝ ╚═╝ ╚═╝╚══════╝╚═╝ |
| 23 | +# by jopo666 (2023) |
| 24 | +# """ |
25 | 25 | # Rich-click options.
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26 | 26 | click.rich_click.USE_RICH_MARKUP = True
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27 | 27 | click.rich_click.RANGE_STRING = ""
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28 |
| -click.rich_click.HEADER_TEXT = LOGO |
| 28 | +# click.rich_click.HEADER_TEXT = LOGO |
29 | 29 | click.rich_click.STYLE_HEADER_TEXT = "dim"
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30 | 30 | click.rich_click.MAX_WIDTH = 120
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31 | 31 | click.rich_click.SHOW_METAVARS_COLUMN = False
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@@ -306,8 +306,7 @@ def cut_slides(
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306 | 306 | use_csv: bool = False,
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307 | 307 | num_workers: Optional[int] = None,
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308 | 308 | ) -> None:
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309 |
| - """CLI interface to extract tile images from slides.""" |
310 |
| - # Filter slide paths. |
| 309 | + """Extract tile images from histological slides.""" |
311 | 310 | paths = filter_slide_paths(
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312 | 311 | all_paths=[x if isinstance(x, Path) else Path(x) for x in paths],
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313 | 312 | parent_dir=parent_dir,
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