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Commits on Oct 23, 2012

• implements memory efficient VI computation; still a little slow could be reimplemented in NP at some point

  stephenplaza

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Commits on Oct 18, 2012

• Use explicit include() for dependencies to version control tarballs. Also fill in dependencies

  DocSavage

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Commits on Oct 15, 2012

• small fix to regression

  stephenplaza

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Commits on Oct 13, 2012

• Add CMake build using new flyem-build system

  DocSavage

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Commits on Oct 10, 2012

• dumps autoproof stack so that it can be evaluated with comparestacks

  stephenplaza

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Commits on Oct 9, 2012

• adds option to trim a border from the image stack; needs updated NeuroProof for agglomeration to work properly in np mode

  stephenplaza

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• implements an autoproofreader in the probability validation code

  stephenplaza

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Commits on Oct 3, 2012

• adds a probability validation algorithm

  stephenplaza

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Commits on Oct 2, 2012

• Fix missing logging import

  DocSavage

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Commits on Oct 1, 2012

• Merge pull request #52 from anirbanchakraborty/ani-selective-agglo

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  jni

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Commits on Sep 25, 2012

• Removed whitespaces in bin/ray-train

  anirbanchakraborty

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Commits on Sep 24, 2012

• Add changes suggested in pull request.

  anirbanchakraborty

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  ecc7eaf

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• prints traceback on error now

  stephenplaza

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Commits on Sep 21, 2012

• Use exec directory to find git commit

  jni

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Commits on Sep 19, 2012

• Add suggested changes to ani-selective-agglo

  anirbanchakraborty

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Commits on Sep 18, 2012

• Add mito-aware segmentation

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  anirbanchakraborty

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• Add initial mito-aware selective segmentation

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  anirbanchakraborty

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• Initial changes to mitochondria agglomeration

  anirbanchakraborty

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Commits on Sep 14, 2012

• Merge branch 'sklearn-rf' into develop

  jni

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• Make vigra random forest the default

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  jni

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• Bug fix: data is called d

  jni

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• Use limited number of examples in Rag.learn_agglomerate

  jni

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• Add support for learning on subset of data

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  jni

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• Add support for RF classifier from sklearn

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  jni

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• Add type-agnostic save_classifier function

  jni

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• Add a type-agnostic load_classifier function

  jni

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Commits on Sep 11, 2012

• Merge branch 'faster-synws' into develop

  jni

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Commits on Sep 10, 2012

• Bug fix: update seeds >= 1, not >1

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  jni

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Commits on Sep 6, 2012

• improves classifier check

  stephenplaza

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• makes regression work over different machines and users

  stephenplaza

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Commits on Sep 4, 2012

• Bug fix: typo using np. notation

  jni

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• Do a single watershed instead of many

  jni

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Commits on Sep 3, 2012

• Ensure ray imports are local to the executables (retry)

  jni

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Commits on Aug 31, 2012

• Ensure ray imports are local to the executable scripts

  jni

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Commits on Aug 28, 2012

• updates regression to use new inclusion classifier in NP mode

  stephenplaza

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