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clone correct fork/branch for qtp-sequencing tests
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.github/workflows/buildContainer.yaml

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@@ -162,8 +162,8 @@ jobs:
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- name: Execute tests in the running services
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run: |
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sleep 5
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fork=`if [[ "${{ matrix.plugin }}" == "qp-deblur" || "${{ matrix.plugin }}" == "qp-target-gene" ]]; then echo "jlab"; else echo "qiita-spots"; fi`
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branch=`if [[ "${{ matrix.plugin }}" == "qp-deblur" ]]; then echo "uncouplePlugins"; elif [[ "${{ matrix.plugin }}" == "qp-target-gene" ]]; then echo "uncouplePlugin"; elif [[ "${{ matrix.plugin }}" == "qtp-job-output-folder" ]]; then echo "main"; else echo "master"; fi`
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fork=`if [[ "${{ matrix.plugin }}" == "qp-deblur" || "${{ matrix.plugin }}" == "qp-target-gene" || "${{ matrix.plugin }}" == "qtp-sequencing" ]]; then echo "jlab"; else echo "qiita-spots"; fi`
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branch=`if [[ "${{ matrix.plugin }}" == "qp-deblur" ]]; then echo "uncouplePlugins"; elif [[ "${{ matrix.plugin }}" == "qp-target-gene" || "${{ matrix.plugin }}" == "qtp-sequencing" ]]; then echo "uncouplePlugin"; elif [[ "${{ matrix.plugin }}" == "qtp-job-output-folder" ]]; then echo "main"; else echo "master"; fi`
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docker compose exec ${{ matrix.plugin }} /bin/bash -c "PLUGIN_FORK=$fork PLUGIN_BRANCH=$branch bash /test_plugin.sh"
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- name: Push image to ghcr (only if tests passed)

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