Dockerfile

# Copyright 2022, The Johns Hopkins University Applied Physics Laboratory LLC
# All rights reserved.
# Distributed under the terms of the BSD 3-Clause License.
#
# NO WARRANTY, NO LIABILITY. THIS MATERIAL IS PROVIDED “AS IS.” JHU/APL MAKES NO
# REPRESENTATION OR WARRANTY WITH RESPECT TO THE PERFORMANCE OF THE MATERIALS, INCLUDING
# THEIR SAFETY, EFFECTIVENESS, OR COMMERCIAL VIABILITY, AND DISCLAIMS ALL WARRANTIES IN
# THE MATERIAL, WHETHER EXPRESS OR IMPLIED, INCLUDING (BUT NOT LIMITED TO) ANY AND ALL
# IMPLIED WARRANTIES OF PERFORMANCE, MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE,
# AND NON-INFRINGEMENT OF INTELLECTUAL PROPERTY OR OTHER THIRD PARTY RIGHTS. ANY USER OF
# THE MATERIAL ASSUMES THE ENTIRE RISK AND LIABILITY FOR USING THE MATERIAL. IN NO EVENT
# SHALL JHU/APL BE LIABLE TO ANY USER OF THE MATERIAL FOR ANY ACTUAL, INDIRECT,
# CONSEQUENTIAL, SPECIAL OR OTHER DAMAGES ARISING FROM THE USE OF, OR INABILITY TO USE,
# THE MATERIAL, INCLUDING, BUT NOT LIMITED TO, ANY DAMAGES FOR LOST PROFITS.

FROM python:3.10-slim-buster

RUN apt update
RUN apt -y install parallel
RUN apt -y install ncbi-blast+
RUN apt -y install wkhtmltopdf

# Install requirements first to make use of Docker's cache
COPY webapp/requirements.txt /app/webapp/requirements.txt
RUN pip install -r /app/webapp/requirements.txt

COPY . /app

WORKDIR /app/webapp

EXPOSE 5000

CMD ["python3", "-m" , "flask", "run", "--host=0.0.0.0"]