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icervenka/Readme.md

Hello there

My name is Igor Cervenka and I am a molecular biologist turned data scientist, currently working as a researcher in Stockholm, Sweden

About me

I started gravitating towards coding during my undergraduate studies, because I realised that with a bit of work, majority of my laboratory tasks could be automated. And it all kind of snowballed from there... analysis of data from high throughput metods, visualisation of multi-dimensional datasets, data science and machine learning.

If you are also interested in the research work that we do, you can head over to ruaslab.science to learn about how beneficial exercise can be to your well-being. As you can imagine, I was tasked with the website creation and maintenance.

My coding interests

R python git php sql laravel html5 d3js javascript shell

What I'm up to

  • Next generation sequencing pipelines and automation
  • Visualisation of time series data
  • Analysis of biological pathways from gene expression data
  • Machine learning
  • Finding motivation to update my homepage
  • Artificial intelligence R

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  1. enhancer_correlation_snakemake enhancer_correlation_snakemake Public

    R 1

  2. clamsvis clamsvis Public

    R

  3. clusterprofiler_reports_snakemake clusterprofiler_reports_snakemake Public

    HTML 1

  4. rnaseq_pipeline_snakemake rnaseq_pipeline_snakemake Public

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  5. clams_convert clams_convert Public

    Python

  6. pamgene_analysis pamgene_analysis Public

    Analysis of kinase activity profiling

    R