diff --git a/cli b/cli
index 64a8416..893fa1e 160000
--- a/cli
+++ b/cli
@@ -1 +1 @@
-Subproject commit 64a84163c72654b7e681f3089884ba3c36bb758e
+Subproject commit 893fa1e02a13aba90d4b4be6176fabced16cf54f
diff --git a/coverage-depth b/coverage-depth
index eea2f17..462ee9a 160000
--- a/coverage-depth
+++ b/coverage-depth
@@ -1 +1 @@
-Subproject commit eea2f177464a5295b6c74d77a50840712f35cc27
+Subproject commit 462ee9a8b8ceed893298637173fccaa8d4e6e584
diff --git a/io b/io
index 627b94a..7a47445 160000
--- a/io
+++ b/io
@@ -1 +1 @@
-Subproject commit 627b94ac1bb74b44dfd3120128e9fccce321d2c4
+Subproject commit 7a474457d9298d87db58279c33dd6a649aaec2c3
diff --git a/magic-rdds b/magic-rdds
index 7fb98ba..f469f85 160000
--- a/magic-rdds
+++ b/magic-rdds
@@ -1 +1 @@
-Subproject commit 7fb98ba79cc15d790256fa4af0054f90b9cfec85
+Subproject commit f469f85e499594efef0b0d68f8f01e91cc9669b8
diff --git a/math b/math
index 3ff5af9..0e34622 160000
--- a/math
+++ b/math
@@ -1 +1 @@
-Subproject commit 3ff5af975532da6924a8db0a7b88619967fc3093
+Subproject commit 0e346221c79a66ad44c891425043f671908adeaf
diff --git a/readsets b/readsets
index 443c525..5413bf8 160000
--- a/readsets
+++ b/readsets
@@ -1 +1 @@
-Subproject commit 443c5251a739feb0163908d8bc4ea1d8234a58e1
+Subproject commit 5413bf827c00df6e9e656dc5e2080130955fb992
diff --git a/sbt-parent b/sbt-parent
index f27d5b8..13bcf40 160000
--- a/sbt-parent
+++ b/sbt-parent
@@ -1 +1 @@
-Subproject commit f27d5b8c617b7efc8dfa18db2de9147b703d440c
+Subproject commit 13bcf40c5e1d5483ef5b1c8a00693b7ef6fc3ec8
diff --git a/spark-bam b/spark-bam
index 3f7c2f8..eb99e49 160000
--- a/spark-bam
+++ b/spark-bam
@@ -1 +1 @@
-Subproject commit 3f7c2f80f18e0cd7b949160b35da3ca7bfa96c96
+Subproject commit eb99e4913782f518d5f1e67bae9803d845bce95c