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.gitmodules
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[submodule "test-utils"]
path = test-utils
url = https://github.com/hammerlab/test-utils.git
[submodule "spark-tests"]
path = spark-tests
url = https://github.com/hammerlab/spark-tests.git
[submodule "sbt-parent"]
path = sbt-parent
url = https://github.com/hammerlab/sbt-parent.git
[submodule "reference"]
path = reference
url = https://github.com/hammerlab/genomic-reference.git
[submodule "loci"]
path = loci
url = https://github.com/hammerlab/genomic-loci.git
[submodule "magic-rdds"]
path = magic-rdds
url = https://github.com/hammerlab/magic-rdds.git
[submodule "adam-core"]
path = adam-core
url = https://github.com/hammerlab/adam.git
[submodule "guacamole"]
path = guacamole
url = https://github.com/hammerlab/guacamole.git
[submodule "genomic-readsets"]
path = readsets
url = https://github.com/hammerlab/genomic-readsets.git
[submodule "utils"]
path = utils
url = https://github.com/hammerlab/genomic-utils.git
[submodule "reads"]
path = reads
url = https://github.com/hammerlab/genomic-reads.git
[submodule "iterator"]
path = iterator
url = git@github.com:hammerlab/iterators.git
[submodule "spark-commands"]
path = cli
url = git@github.com:hammerlab/spark-commands.git
[submodule "dataproc"]
path = dataproc
url = git@github.com:hammerlab/dataproc.git
[submodule "spark-util"]
path = spark-util
url = git@github.com:hammerlab/spark-util.git
[submodule "path-utils"]
path = path-utils
url = git@github.com:hammerlab/path-utils.git
[submodule "utils-cli"]
path = utils-cli
url = git@github.com:hammerlab/bdg-utils.git
[submodule "hadoop-bam"]
path = hadoop-bam
url = github.com:hammerlab/hadoop-bam.git
[submodule "spark-bam"]
path = spark-bam
url = github.com:hammerlab/spark-bam.git
[submodule "coverage-depth"]
path = coverage-depth
url = git@github.com:hammerlab/coverage-depth.git
[submodule "suffix-arrays"]
path = suffix-arrays
url = git@github.com:hammerlab/suffix-arrays.git
[submodule "string-utils"]
path = string-utils
url = git@github.com:hammerlab/string-utils.git
[submodule "io"]
path = io
url = git@github.com:hammerlab/io-utils.git
[submodule "math"]
path = math
url = git@github.com:hammerlab/math-utils.git
[submodule "shapeless"]
path = shapeless
url = git@github.com:hammerlab/shapeless-utils.git