Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Update org.deegree so that it can be used in hale studio that uses java 17 #1002

Open
kapil-agnihotri opened this issue Nov 18, 2022 · 1 comment
Open

Update org.deegree so that it can be used in hale studio that uses java 17 #1002

kapil-agnihotri opened this issue Nov 18, 2022 · 1 comment
Labels
bug confirmed Issue has been confirmed platform

Comments

@kapil-agnihotri
Copy link
Member

Units tests that are run on `` bundle fails due to missing jaxb-api on classpath.

This happens because, org.deegree still refers to javax.xml libraries for jaxb related dependencies. However, after migrating hale studio with java17, jdk no more provides javax.xml and Jakarta dependencies must be used.

This ticket is to add Jakarta dependencies to org.deegree so that this bundle can again be included in the hale studio.

excluded bundles from the product

- eu.esdihumboldt.hale.io.deegree
- eu.esdihumboldt.hale.io.deegree.ui
- eu.esdihumboldt.hale.io.deegree.test

excluded feature from Hale.product

eu.esdihumboldt.hale.io.feature.deegree

Stacktrace of the errors:

18.11.2022 11:57:17 ERROR o.d.c.x.j.JAXBUtils.getUnmarshaller(118) - Unable to instantiate JAXBContext for package 'org.deegree.cs.persistence.deegree.d3.jaxb'
18.11.2022 11:57:17 ERROR o.d.c.p.d.d.DeegreeCRSStoreProvider.getCRSStore(113) - Error in crs store configuration file 'bundleresource://398.fwk563161564/org/deegree/cs/persistence/default.xml': Implementation of JAXB-API has not been found on module path or classpath.
18.11.2022 11:57:17 ERROR o.d.c.p.CRSManager.handleConfigFile(194) - Error creating crs store: Error in crs store configuration file 'bundleresource://398.fwk563161564/org/deegree/cs/persistence/default.xml': Implementation of JAXB-API has not been found on module path or classpath.
E.18.11.2022 11:57:20 WARN  o.d.g.s.GMLSchemaInfoSet.buildGeometryPropertyType(987) - Unhandled particle: MODEL_GROUP
E
2 test(s) run. Time: 9540ms

2 failures:
1) testSuccessSaveConfig(eu.esdihumboldt.hale.io.deegree.mapping.MappingWriterTest)
org.deegree.commons.tom.ReferenceResolvingException: Unable to resolve reference to 'EPSG:4326'.
	at org.deegree.commons.tom.Reference.getReferencedObject(Reference.java:164)
	at org.deegree.cs.refs.coordinatesystem.CRSRef.getReferencedObject(CRSRef.java:239)
	at org.deegree.cs.refs.coordinatesystem.CRSRef.getDimension(CRSRef.java:224)
	at eu.esdihumboldt.hale.io.deegree.mapping.config.GenericMappingConfiguration.getGeometryStorageParameters(GenericMappingConfiguration.java:246)
	at eu.esdihumboldt.hale.io.deegree.mapping.MappingHelper.mapApplicationSchema(MappingHelper.groovy:36)
	at eu.esdihumboldt.hale.io.deegree.mapping.MappingWriter.getMappedSchema(MappingWriter.java:296)
	at eu.esdihumboldt.hale.io.deegree.mapping.MappingWriter.saveConfig(MappingWriter.java:134)
	at eu.esdihumboldt.hale.io.deegree.mapping.MappingWriter$saveConfig.call(Unknown Source)
	at org.codehaus.groovy.runtime.callsite.CallSiteArray.defaultCall(CallSiteArray.java:47)
	at org.codehaus.groovy.runtime.callsite.AbstractCallSite.call(AbstractCallSite.java:115)
	at org.codehaus.groovy.runtime.callsite.AbstractCallSite.call(AbstractCallSite.java:127)
	at eu.esdihumboldt.hale.io.deegree.mapping.MappingWriterTest$_testSuccessSaveConfig_closure1.doCall(MappingWriterTest.groovy:50)
	at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:77)
	at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
	at java.base/java.lang.reflect.Method.invoke(Method.java:568)
	at org.codehaus.groovy.reflection.CachedMethod.invoke(CachedMethod.java:101)
	at groovy.lang.MetaMethod.doMethodInvoke(MetaMethod.java:323)
	at org.codehaus.groovy.runtime.metaclass.ClosureMetaClass.invokeMethod(ClosureMetaClass.java:263)
	at groovy.lang.MetaClassImpl.invokeMethod(MetaClassImpl.java:1041)
	at groovy.lang.Closure.call(Closure.java:405)
	at groovy.lang.Closure.call(Closure.java:421)
	at org.codehaus.groovy.runtime.IOGroovyMethods.withStream(IOGroovyMethods.java:1297)
	at org.codehaus.groovy.runtime.ResourceGroovyMethods.withOutputStream(ResourceGroovyMethods.java:1838)
	at org.codehaus.groovy.runtime.dgm$1082.invoke(Unknown Source)
	at org.codehaus.groovy.runtime.callsite.PojoMetaMethodSite$PojoMetaMethodSiteNoUnwrapNoCoerce.invoke(PojoMetaMethodSite.java:244)
	at org.codehaus.groovy.runtime.callsite.PojoMetaMethodSite.call(PojoMetaMethodSite.java:53)
	at org.codehaus.groovy.runtime.callsite.CallSiteArray.defaultCall(CallSiteArray.java:47)
	at org.codehaus.groovy.runtime.callsite.AbstractCallSite.call(AbstractCallSite.java:115)
	at org.codehaus.groovy.runtime.callsite.AbstractCallSite.call(AbstractCallSite.java:127)
	at eu.esdihumboldt.hale.io.deegree.mapping.MappingWriterTest.testSuccessSaveConfig(MappingWriterTest.groovy:50)
	at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:77)
	at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
	at java.base/java.lang.reflect.Method.invoke(Method.java:568)
	at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:59)
	at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:12)
	at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:56)
	at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:17)
	at org.junit.runners.ParentRunner$3.evaluate(ParentRunner.java:306)
	at org.junit.runners.BlockJUnit4ClassRunner$1.evaluate(BlockJUnit4ClassRunner.java:100)
	at org.junit.runners.ParentRunner.runLeaf(ParentRunner.java:366)
	at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:103)
	at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:63)
	at org.junit.runners.ParentRunner$4.run(ParentRunner.java:331)
	at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:79)
	at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:329)
	at org.junit.runners.ParentRunner.access$100(ParentRunner.java:66)
	at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:293)
	at org.junit.runners.ParentRunner$3.evaluate(ParentRunner.java:306)
	at org.junit.runners.ParentRunner.run(ParentRunner.java:413)
	at org.junit.runners.Suite.runChild(Suite.java:128)
	at org.junit.runners.Suite.runChild(Suite.java:27)
	at org.junit.runners.ParentRunner$4.run(ParentRunner.java:331)
	at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:79)
	at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:329)
	at org.junit.runners.ParentRunner.access$100(ParentRunner.java:66)
	at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:293)
	at org.junit.runners.ParentRunner$3.evaluate(ParentRunner.java:306)
	at org.junit.runners.ParentRunner.run(ParentRunner.java:413)
	at org.junit.runner.JUnitCore.run(JUnitCore.java:137)
	at org.junit.runner.JUnitCore.run(JUnitCore.java:115)
	at org.junit.runner.JUnitCore.run(JUnitCore.java:105)
	at de.fhg.igd.equinox.test.app.runner.TestExecutor.executeTests(TestExecutor.java:104)
	at de.fhg.igd.equinox.test.app.runner.TestRunner.runTests(TestRunner.java:115)
	at de.fhg.igd.equinox.test.app.runner.TestRunner.execute(TestRunner.java:90)
	at de.fhg.igd.equinox.test.app.TestRunnerApplication.run(TestRunnerApplication.java:80)
	at de.fhg.igd.equinox.test.app.TestRunnerApplication.run(TestRunnerApplication.java:1)
	at de.fhg.igd.equinox.test.app.internal.AbstractApplication.run(AbstractApplication.java:55)
	at de.fhg.igd.equinox.test.app.internal.AbstractApplication.start(AbstractApplication.java:37)
	at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:203)
	at org.eclipse.equinox.internal.app.AnyThreadAppLauncher.run(AnyThreadAppLauncher.java:30)
	at java.base/java.lang.Thread.run(Thread.java:833)
2) testSuccessSaveDDL(eu.esdihumboldt.hale.io.deegree.mapping.MappingWriterTest)
org.deegree.commons.tom.ReferenceResolvingException: Unable to resolve reference to 'EPSG:4326'.
	at org.deegree.commons.tom.Reference.getReferencedObject(Reference.java:164)
	at org.deegree.cs.refs.coordinatesystem.CRSRef.getReferencedObject(CRSRef.java:239)
	at org.deegree.cs.refs.coordinatesystem.CRSRef.getDimension(CRSRef.java:224)
	at eu.esdihumboldt.hale.io.deegree.mapping.config.GenericMappingConfiguration.getGeometryStorageParameters(GenericMappingConfiguration.java:246)
	at eu.esdihumboldt.hale.io.deegree.mapping.MappingHelper.mapApplicationSchema(MappingHelper.groovy:36)
	at eu.esdihumboldt.hale.io.deegree.mapping.MappingWriter.getMappedSchema(MappingWriter.java:296)
	at eu.esdihumboldt.hale.io.deegree.mapping.MappingWriter.saveDDL(MappingWriter.java:278)
	at eu.esdihumboldt.hale.io.deegree.mapping.MappingWriter$saveDDL$0.call(Unknown Source)
	at org.codehaus.groovy.runtime.callsite.CallSiteArray.defaultCall(CallSiteArray.java:47)
	at org.codehaus.groovy.runtime.callsite.AbstractCallSite.call(AbstractCallSite.java:115)
	at org.codehaus.groovy.runtime.callsite.AbstractCallSite.call(AbstractCallSite.java:127)
	at eu.esdihumboldt.hale.io.deegree.mapping.MappingWriterTest$_testSuccessSaveDDL_closure2.doCall(MappingWriterTest.groovy:71)
	at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:77)
	at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
	at java.base/java.lang.reflect.Method.invoke(Method.java:568)
	at org.codehaus.groovy.reflection.CachedMethod.invoke(CachedMethod.java:101)
	at groovy.lang.MetaMethod.doMethodInvoke(MetaMethod.java:323)
	at org.codehaus.groovy.runtime.metaclass.ClosureMetaClass.invokeMethod(ClosureMetaClass.java:263)
	at groovy.lang.MetaClassImpl.invokeMethod(MetaClassImpl.java:1041)
	at groovy.lang.Closure.call(Closure.java:405)
	at groovy.lang.Closure.call(Closure.java:421)
	at org.codehaus.groovy.runtime.IOGroovyMethods.withStream(IOGroovyMethods.java:1297)
	at org.codehaus.groovy.runtime.ResourceGroovyMethods.withOutputStream(ResourceGroovyMethods.java:1838)
	at org.codehaus.groovy.runtime.dgm$1082.invoke(Unknown Source)
	at org.codehaus.groovy.runtime.callsite.PojoMetaMethodSite$PojoMetaMethodSiteNoUnwrapNoCoerce.invoke(PojoMetaMethodSite.java:244)
	at org.codehaus.groovy.runtime.callsite.PojoMetaMethodSite.call(PojoMetaMethodSite.java:53)
	at org.codehaus.groovy.runtime.callsite.CallSiteArray.defaultCall(CallSiteArray.java:47)
	at org.codehaus.groovy.runtime.callsite.AbstractCallSite.call(AbstractCallSite.java:115)
	at org.codehaus.groovy.runtime.callsite.AbstractCallSite.call(AbstractCallSite.java:127)
	at eu.esdihumboldt.hale.io.deegree.mapping.MappingWriterTest.testSuccessSaveDDL(MappingWriterTest.groovy:71)
	at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:77)
	at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
	at java.base/java.lang.reflect.Method.invoke(Method.java:568)
	at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:59)
	at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:12)
	at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:56)
	at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:17)
	at org.junit.runners.ParentRunner$3.evaluate(ParentRunner.java:306)
	at org.junit.runners.BlockJUnit4ClassRunner$1.evaluate(BlockJUnit4ClassRunner.java:100)
	at org.junit.runners.ParentRunner.runLeaf(ParentRunner.java:366)
	at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:103)
	at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:63)
	at org.junit.runners.ParentRunner$4.run(ParentRunner.java:331)
	at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:79)
	at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:329)
	at org.junit.runners.ParentRunner.access$100(ParentRunner.java:66)
	at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:293)
	at org.junit.runners.ParentRunner$3.evaluate(ParentRunner.java:306)
	at org.junit.runners.ParentRunner.run(ParentRunner.java:413)
	at org.junit.runners.Suite.runChild(Suite.java:128)
	at org.junit.runners.Suite.runChild(Suite.java:27)
	at org.junit.runners.ParentRunner$4.run(ParentRunner.java:331)
	at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:79)
	at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:329)
	at org.junit.runners.ParentRunner.access$100(ParentRunner.java:66)
	at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:293)
	at org.junit.runners.ParentRunner$3.evaluate(ParentRunner.java:306)
	at org.junit.runners.ParentRunner.run(ParentRunner.java:413)
	at org.junit.runner.JUnitCore.run(JUnitCore.java:137)
	at org.junit.runner.JUnitCore.run(JUnitCore.java:115)
	at org.junit.runner.JUnitCore.run(JUnitCore.java:105)
	at de.fhg.igd.equinox.test.app.runner.TestExecutor.executeTests(TestExecutor.java:104)
	at de.fhg.igd.equinox.test.app.runner.TestRunner.runTests(TestRunner.java:115)
	at de.fhg.igd.equinox.test.app.runner.TestRunner.execute(TestRunner.java:90)
	at de.fhg.igd.equinox.test.app.TestRunnerApplication.run(TestRunnerApplication.java:80)
	at de.fhg.igd.equinox.test.app.TestRunnerApplication.run(TestRunnerApplication.java:1)
	at de.fhg.igd.equinox.test.app.internal.AbstractApplication.run(AbstractApplication.java:55)
	at de.fhg.igd.equinox.test.app.internal.AbstractApplication.start(AbstractApplication.java:37)
	at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:203)
	at org.eclipse.equinox.internal.app.AnyThreadAppLauncher.run(AnyThreadAppLauncher.java:30)
	at java.base/java.lang.Thread.run(Thread.java:833)
@kapil-agnihotri kapil-agnihotri mentioned this issue Nov 18, 2022
Merged
@github-actions GitHub Actions
Copy link

github-actions bot commented May 7, 2024

This issue has been automatically marked as stale because it has not had activity in the last 60 days. It will be closed in two weeks if no further activity occurs. Thank you for your contributions.

@github-actions github-actions bot added the stale label May 7, 2024
@stempler stempler removed the stale label May 7, 2024
@florianesser florianesser added bug platform confirmed Issue has been confirmed and removed pinned labels May 22, 2024
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
bug confirmed Issue has been confirmed platform
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
3 participants
@stempler @florianesser @kapil-agnihotri