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Destripe VisiumHD

Status: Open.

#215 In gustaveroussy/sopa;

· NadineBestard opened on Feb 18, 2025

[Bug] AssertionError: Invalid patching

Status: Open.

#214 In gustaveroussy/sopa;

· jeffquinn-msk opened on Feb 18, 2025

Reading a slide image while retaining channel data?

Status: Open.

#213 In gustaveroussy/sopa;

· austinv11 opened on Feb 17, 2025

Missing adata.h5ad in the explorer

Status: Open.

#211 In gustaveroussy/sopa;

· RitaRuoxinLi opened on Feb 14, 2025

[Question] Assignement of transcripts located on polygons overlap after patch segmentation

Status: Open.

#198 In gustaveroussy/sopa;

· ConstensouxAlexis opened on Feb 4, 2025

Baysor Not Running on Windows

Status: Open.

#185 In gustaveroussy/sopa;

· marsdenl opened on Jan 28, 2025

[Feature] Allow two separate categories of shapes to be written to Xenium Explorer

Status: Open.

#182 In gustaveroussy/sopa;

· pakiessling opened on Jan 21, 2025

[Feature] Clarify how to get the CosMX input

Status: Open.

#180 In gustaveroussy/sopa;

· quentinblampey opened on Jan 21, 2025

[Bug] sopa write explorer fails after H&E image is added

Status: Open.

#176 In gustaveroussy/sopa;

· jpark27 opened on Jan 10, 2025

[Feature] Sopa2 with BIDcell/segger

Status: Open.

#165 In gustaveroussy/sopa;

· jpark27 opened on Dec 18, 2024

reading .hdf5 file in sopa?

Status: Open.

#163 In gustaveroussy/sopa;

· KunHHE opened on Dec 13, 2024

[Feature] Multiple run of Cellpose/Baysor

Status: Open.

#154 In gustaveroussy/sopa;

· lguerard opened on Nov 19, 2024