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Commits on Mar 10, 2025

• Update SPRINT_summary_results.R

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Commits on Mar 5, 2025

• bug fix samtols memory & set pipeline new version

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Commits on Mar 4, 2025

• big fix path 1.1.0

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Commits on Mar 3, 2025

• replace dev by 1.1.0

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• typo beegfs02

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• bug fix one sample

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Commits on Feb 26, 2025

• Add threshold for auto

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Commits on Feb 24, 2025

• Correct typo in README.md

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• update README explanation

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• add 'min_nb_sampled_reads_for_auto' option

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• update README

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• add tests

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• update README for installation

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• update README + profile

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• update dev

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Commits on Jun 21, 2024

• update memory

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Commits on Jun 20, 2024

• remove temp directory()

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• correct typo

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• bug fix

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Commits on Jun 19, 2024

• Update config.yaml

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• Update README.md

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Commits on Jun 18, 2024

• add snakemake environment

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• Update README.md

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• Update README.md

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• add sing image + correct README and decoration of the pipeline

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Commits on Jun 17, 2024

• debug REI environment + summary script

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• correction fastp output to fastq for SPRINT + debug REI and summary scripts

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Commits on Jun 15, 2024

• correct fq.gz into fq in fastp dor SPRINT

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Commits on Jun 13, 2024

• add conda env

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• update README

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• update README

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• delete profile local

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• add pipeline steps in the README.md

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• first commit of the code

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• Update README.md

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