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Commits on Mar 26, 2024

• - Added script to run ms2_runfull.

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  joewandy

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Commits on Mar 24, 2024

• - Added MOTIFDB dump to repo

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  joewandy

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Commits on Mar 12, 2024

• Tidied up of messy ms2lda script. This is the primary script executed by GNPS nextflow

  joewandy

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• Added missing dependency of pyMolNetEnhancer

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Commits on Mar 10, 2024

• Updated README

  joewandy

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• Black formatting

  joewandy

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• Added some unit tests

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• Add version numbers to environment.yml

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Commits on Mar 2, 2024

• - Added a method to download example data.

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  joewandy

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• Reorganised notebooks

  joewandy

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• Directory restructure

  joewandy

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• - Added pytest to conda yml file

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  joewandy

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• Better selection of motifsets to dump

  joewandy

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• PyArrow dependency required by pandas

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Commits on Feb 29, 2024

• Script to dump whitelist motifsets from MotifDB

  joewandy

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Commits on Feb 28, 2024

• Merge branch 'master' into motifdb

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Commits on Feb 22, 2024

• Updated notebook to make it runnable

  joewandy

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Commits on Nov 28, 2023

• Initial work to dump motifdb

  joewandy

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Commits on Sep 11, 2023

• using a local version of pymolnetenhancer. The current version is not supported by gnps1 so we need to be back to provide service to users

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Commits on Sep 9, 2023

• header not encoded

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Commits on Jul 27, 2023

• updated ms2lda to python3

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Commits on Jul 18, 2023

• Code tidy-up

  joewandy

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• Code tidy-up

  joewandy

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Commits on Mar 8, 2023

• Merge pull request #3 from glasgowcompbio/implement_gensim

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  joewandy

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• Move common and constants to ms2lda to prevent import errors

  niekdejonge

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• Add build_gensim_corpus

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• fix import statements

  niekdejonge

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• copied run_gensim from ms2lda

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Commits on Feb 21, 2023

• Merge commit 'aa2867c6e65abc71bcd1343bd0abeae32cd5224b'

  joewandy

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• Notebook updates

  joewandy

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• Python 3 and other minor fixes

  joewandy

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• Added GNPS screenshots for references

  joewandy

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Commits on Apr 12, 2022

• Create LICENSE

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• Update README.md

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• Update README.md

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