Replace merge-tree in more places

Cargo.toml

@@ -42,7 +42,7 @@ resolver = "2"
 [workspace.dependencies]
 bstr = "1.10.0"
 # Add the `tracing` or `tracing-detail` features to see more of gitoxide in the logs. Useful to see which programs it invokes.
-gix = { git = "https://github.com/Byron/gitoxide", rev = "3fb989be21c739bbfeac93953c1685e7c6cd2106", default-features = false, features = [
+gix = { git = "https://github.com/Byron/gitoxide", rev = "a8765330fc16997dee275866b18a128dec1c5d55", default-features = false, features = [
 ] }
 git2 = { version = "0.19.0", features = [
     "vendored-openssl",

crates/gitbutler-branch-actions/Cargo.toml

@@ -9,7 +9,7 @@ publish = false
 tracing.workspace = true
 anyhow = "1.0.92"
 git2.workspace = true
-gix = { workspace = true, features = ["blob-diff", "revision", "blob-merge"] }
+gix = { workspace = true, features = ["blob-diff", "revision", "merge"] }
 tokio.workspace = true
 gitbutler-oplog.workspace = true
 gitbutler-repo.workspace = true

crates/gitbutler-branch-actions/src/base.rs

@@ -1,24 +1,24 @@
 use std::{path::Path, time};
 
-use anyhow::{anyhow, Context, Result};
+use crate::{
+    conflicts::RepoConflictsExt,
+    hunk::VirtualBranchHunk,
+    integration::update_workspace_commit,
+    remote::{commit_to_remote_commit, RemoteCommit},
+    VirtualBranchesExt,
+};
+use anyhow::{anyhow, bail, Context, Result};
 use gitbutler_branch::GITBUTLER_WORKSPACE_REFERENCE;
 use gitbutler_command_context::CommandContext;
 use gitbutler_error::error::Marker;
+use gitbutler_oxidize::{git2_to_gix_object_id, gix_to_git2_oid};
 use gitbutler_project::FetchResult;
 use gitbutler_reference::{Refname, RemoteRefname};
-use gitbutler_repo::{LogUntil, RepositoryExt};
+use gitbutler_repo::{GixRepositoryExt, LogUntil, RepositoryExt};
 use gitbutler_repo_actions::RepoActionsExt;
 use gitbutler_stack::{BranchOwnershipClaims, Stack, Target, VirtualBranchesHandle};
 use serde::Serialize;
 
-use crate::{
-    conflicts::RepoConflictsExt,
-    hunk::VirtualBranchHunk,
-    integration::update_workspace_commit,
-    remote::{commit_to_remote_commit, RemoteCommit},
-    VirtualBranchesExt,
-};
-
 #[derive(Debug, Serialize, PartialEq, Clone)]
 #[serde(rename_all = "camelCase")]
 pub struct BaseBranch {
@@ -50,8 +50,8 @@ pub(crate) fn get_base_branch_data(ctx: &CommandContext) -> Result<BaseBranch> {
 }
 
 fn go_back_to_integration(ctx: &CommandContext, default_target: &Target) -> Result<BaseBranch> {
-    let statuses = ctx
-        .repository()
+    let repo = ctx.repository();
+    let statuses = repo
         .statuses(Some(
             git2::StatusOptions::new()
                 .show(git2::StatusShow::IndexAndWorkdir)
@@ -67,41 +67,36 @@ fn go_back_to_integration(ctx: &CommandContext, default_target: &Target) -> Resu
         .list_branches_in_workspace()
         .context("failed to read virtual branches")?;
 
-    let target_commit = ctx
-        .repository()
+    let target_commit = repo
         .find_commit(default_target.sha)
         .context("failed to find target commit")?;
 
-    let base_tree = target_commit
-        .tree()
-        .context("failed to get base tree from commit")?;
-    let mut final_tree = target_commit
-        .tree()
-        .context("failed to get base tree from commit")?;
+    let base_tree = git2_to_gix_object_id(target_commit.tree_id());
+    let mut final_tree_id = git2_to_gix_object_id(target_commit.tree_id());
+    let gix_repo = ctx.gix_repository_for_merging()?;
+    let (merge_options_fail_fast, conflict_kind) = gix_repo.merge_options_fail_fast()?;
     for branch in &virtual_branches {
         // merge this branches tree with our tree
-        let branch_head = ctx
-            .repository()
-            .find_commit(branch.head())
-            .context("failed to find branch head")?;
-        let branch_tree = branch_head
-            .tree()
-            .context("failed to get branch head tree")?;
-        let mut result = ctx
-            .repository()
-            .merge_trees(&base_tree, &final_tree, &branch_tree, None)
-            .context("failed to merge")?;
-        let final_tree_oid = result
-            .write_tree_to(ctx.repository())
-            .context("failed to write tree")?;
-        final_tree = ctx
-            .repository()
-            .find_tree(final_tree_oid)
-            .context("failed to find written tree")?;
+        let branch_tree_id = git2_to_gix_object_id(
+            repo.find_commit(branch.head())
+                .context("failed to find branch head")?
+                .tree_id(),
+        );
+        let mut merge = gix_repo.merge_trees(
+            base_tree,
+            final_tree_id,
+            branch_tree_id,
+            gix_repo.default_merge_labels(),
+            merge_options_fail_fast.clone(),
+        )?;
+        if merge.has_unresolved_conflicts(conflict_kind) {
+            bail!("Merge failed with conflicts");
+        }
+        final_tree_id = merge.tree.write()?.detach();
     }
 
-    ctx.repository()
-        .checkout_tree_builder(&final_tree)
+    let final_tree = repo.find_tree(gix_to_git2_oid(final_tree_id))?;
+    repo.checkout_tree_builder(&final_tree)
         .force()
         .checkout()
         .context("failed to checkout tree")?;

crates/gitbutler-branch-actions/src/branch_manager/branch_creation.rs

@@ -8,6 +8,7 @@ use gitbutler_error::error::Marker;
 use gitbutler_oplog::SnapshotExt;
 use gitbutler_project::access::WorktreeWritePermission;
 use gitbutler_reference::{Refname, RemoteRefname};
+use gitbutler_repo::GixRepositoryExt;
 use gitbutler_repo::{
     rebase::{cherry_rebase_group, gitbutler_merge_commits},
     LogUntil, RepositoryExt,
@@ -301,29 +302,27 @@ impl BranchManager<'_> {
             ))?;
 
         // Branch is out of date, merge or rebase it
-        let merge_base_tree = repo
+        let merge_base_tree_id = repo
             .find_commit(merge_base)
             .context(format!("failed to find merge base commit {}", merge_base))?
             .tree()
-            .context("failed to find merge base tree")?;
-
-        let branch_tree = repo
-            .find_tree(branch.tree)
-            .context("failed to find branch tree")?;
+            .context("failed to find merge base tree")?
+            .id();
+        let branch_tree_id = branch.tree;
 
         // We don't support having two branches applied that conflict with each other
         {
-            let uncommited_changes_tree = repo.create_wd_tree()?;
-            let branch_merged_with_other_applied_branches = repo
-                .merge_trees(
-                    &merge_base_tree,
-                    &branch_tree,
-                    &uncommited_changes_tree,
-                    None,
+            let uncommited_changes_tree_id = repo.create_wd_tree()?.id();
+            let gix_repo = self.ctx.gix_repository_for_merging_non_persisting()?;
+            let merges_cleanly = gix_repo
+                .merges_cleanly_compat(
+                    merge_base_tree_id,
+                    branch_tree_id,
+                    uncommited_changes_tree_id,
                 )
                 .context("failed to merge trees")?;
 
-            if branch_merged_with_other_applied_branches.has_conflicts() {
+            if !merges_cleanly {
                 for branch in vb_state
                     .list_branches_in_workspace()?
                     .iter()

crates/gitbutler-branch-actions/src/branch_manager/branch_removal.rs

@@ -5,8 +5,11 @@ use git2::Commit;
 use gitbutler_branch::BranchExt;
 use gitbutler_commit::commit_headers::CommitHeadersV2;
 use gitbutler_oplog::SnapshotExt;
+use gitbutler_oxidize::git2_to_gix_object_id;
+use gitbutler_oxidize::gix_to_git2_oid;
 use gitbutler_project::access::WorktreeWritePermission;
 use gitbutler_reference::{normalize_branch_name, ReferenceName, Refname};
+use gitbutler_repo::GixRepositoryExt;
 use gitbutler_repo::RepositoryExt;
 use gitbutler_repo::SignaturePurpose;
 use gitbutler_repo_actions::RepoActionsExt;
@@ -79,7 +82,10 @@ impl BranchManager<'_> {
 
         let repo = self.ctx.repository();
 
-        let base_tree = target_commit.tree().context("failed to get target tree")?;
+        let base_tree_id = target_commit
+            .tree()
+            .context("failed to get target tree")?
+            .id();
 
         let applied_statuses = get_applied_status(self.ctx, None)
             .context("failed to get status by branch")?
@@ -98,13 +104,14 @@ impl BranchManager<'_> {
                 num_branches = applied_statuses.len() - 1
             )
             .entered();
-            applied_statuses
+            let gix_repo = self.ctx.gix_repository()?;
+            let merge_options = gix_repo.tree_merge_options()?;
+            let final_tree_id = applied_statuses
                 .into_iter()
                 .filter(|(branch, _)| branch.id != branch_id)
-                .fold(
-                    target_commit.tree().context("failed to get target tree"),
-                    |final_tree, status| {
-                        let final_tree = final_tree?;
+                .try_fold(
+                    git2_to_gix_object_id(target_commit.tree_id()),
+                    |final_tree_id, status| -> Result<_> {
                         let branch = status.0;
                         let files = status
                             .1
@@ -113,14 +120,18 @@ impl BranchManager<'_> {
                             .collect::<Vec<(PathBuf, Vec<VirtualBranchHunk>)>>();
                         let tree_oid =
                             gitbutler_diff::write::hunks_onto_oid(self.ctx, branch.head(), files)?;
-                        let branch_tree = repo.find_tree(tree_oid)?;
-                        let mut result =
-                            repo.merge_trees(&base_tree, &final_tree, &branch_tree, None)?;
-                        let final_tree_oid = result.write_tree_to(repo)?;
-                        repo.find_tree(final_tree_oid)
-                            .context("failed to find tree")
+                        let mut merge = gix_repo.merge_trees(
+                            git2_to_gix_object_id(base_tree_id),
+                            final_tree_id,
+                            git2_to_gix_object_id(tree_oid),
+                            gix_repo.default_merge_labels(),
+                            merge_options.clone(),
+                        )?;
+                        let final_tree_id = merge.tree.write()?.detach();
+                        Ok(final_tree_id)
                     },
-                )?
+                )?;
+            repo.find_tree(gix_to_git2_oid(final_tree_id))?
         };
 
         let _span = tracing::debug_span!("checkout final tree").entered();

crates/gitbutler-branch-actions/src/branch_trees.rs

@@ -1,17 +1,19 @@
+use crate::VirtualBranchesExt as _;
 use anyhow::{bail, Result};
 use gitbutler_cherry_pick::RepositoryExt;
 use gitbutler_command_context::CommandContext;
 use gitbutler_commit::commit_ext::CommitExt as _;
+use gitbutler_oxidize::{git2_to_gix_object_id, gix_to_git2_oid};
 use gitbutler_project::access::WorktreeWritePermission;
 use gitbutler_repo::rebase::cherry_rebase_group;
-use gitbutler_repo::RepositoryExt as _;
+use gitbutler_repo::{GixRepositoryExt, RepositoryExt as _};
 use gitbutler_stack::Stack;
-
-use crate::VirtualBranchesExt as _;
+use tracing::instrument;
 
 /// Checks out the combined trees of all branches in the workspace.
 ///
 /// This function will fail if the applied branches conflict with each other.
+#[instrument(level = tracing::Level::DEBUG, skip(ctx, _perm), err(Debug))]
 pub fn checkout_branch_trees<'a>(
     ctx: &'a CommandContext,
     _perm: &mut WorktreeWritePermission,
@@ -38,23 +40,30 @@ pub fn checkout_branch_trees<'a>(
         let merge_base = repository
             .merge_base_octopussy(&branches.iter().map(|b| b.head()).collect::<Vec<_>>())?;
 
-        let merge_base_tree = repository.find_commit(merge_base)?.tree()?;
-
-        let mut final_tree = merge_base_tree.clone();
+        let gix_repo = ctx.gix_repository_for_merging()?;
+        let merge_base_tree_id =
+            git2_to_gix_object_id(repository.find_commit(merge_base)?.tree_id());
+        let mut final_tree_id = merge_base_tree_id;
 
+        let (merge_options_fail_fast, conflict_kind) = gix_repo.merge_options_fail_fast()?;
         for branch in branches {
-            let theirs = repository.find_tree(branch.tree)?;
-            let mut merge_index =
-                repository.merge_trees(&merge_base_tree, &final_tree, &theirs, None)?;
-
-            if merge_index.has_conflicts() {
+            let their_tree_id = git2_to_gix_object_id(branch.tree);
+            let mut merge = gix_repo.merge_trees(
+                merge_base_tree_id,
+                final_tree_id,
+                their_tree_id,
+                gix_repo.default_merge_labels(),
+                merge_options_fail_fast.clone(),
+            )?;
+
+            if merge.has_unresolved_conflicts(conflict_kind) {
                 bail!("There appears to be conflicts between the virtual branches");
             };
 
-            let tree_oid = merge_index.write_tree_to(repository)?;
-            final_tree = repository.find_tree(tree_oid)?;
+            final_tree_id = merge.tree.write()?.detach();
         }
 
+        let final_tree = repository.find_tree(gix_to_git2_oid(final_tree_id))?;
         repository
             .checkout_tree_builder(&final_tree)
             .force()

crates/gitbutler-branch-actions/src/integration.rs

@@ -9,8 +9,9 @@ use gitbutler_command_context::CommandContext;
 use gitbutler_commit::commit_ext::CommitExt;
 use gitbutler_error::error::Marker;
 use gitbutler_operating_modes::OPEN_WORKSPACE_REFS;
+use gitbutler_oxidize::{git2_to_gix_object_id, gix_to_git2_oid};
 use gitbutler_project::access::WorktreeWritePermission;
-use gitbutler_repo::SignaturePurpose;
+use gitbutler_repo::{GixRepositoryExt, SignaturePurpose};
 use gitbutler_repo::{LogUntil, RepositoryExt};
 use gitbutler_stack::{Stack, VirtualBranchesHandle};
 use tracing::instrument;
@@ -41,6 +42,7 @@ pub(crate) fn get_workspace_head(ctx: &CommandContext) -> Result<git2::Oid> {
 
     let target_commit = repo.find_commit(target.sha)?;
     let mut workspace_tree = repo.find_real_tree(&target_commit, Default::default())?;
+    let mut workspace_tree_id = git2_to_gix_object_id(workspace_tree.id());
 
     if conflicts::is_conflicting(ctx, None)? {
         let merge_parent = conflicts::merge_parent(ctx)?.ok_or(anyhow!("No merge parent"))?;
@@ -49,22 +51,32 @@ pub(crate) fn get_workspace_head(ctx: &CommandContext) -> Result<git2::Oid> {
         let merge_base = repo.merge_base(first_branch.head(), merge_parent)?;
         workspace_tree = repo.find_commit(merge_base)?.tree()?;
     } else {
+        let gix_repo = ctx.gix_repository_for_merging()?;
+        let (merge_options_fail_fast, conflict_kind) = gix_repo.merge_options_fail_fast()?;
+        let merge_tree_id = git2_to_gix_object_id(repo.find_commit(target.sha)?.tree_id());
         for branch in virtual_branches.iter_mut() {
-            let merge_tree = repo.find_commit(target.sha)?.tree()?;
-            let branch_tree = repo.find_commit(branch.head())?;
-            let branch_tree = repo.find_real_tree(&branch_tree, Default::default())?;
-
-            let mut index = repo.merge_trees(&merge_tree, &workspace_tree, &branch_tree, None)?;
+            let branch_head = repo.find_commit(branch.head())?;
+            let branch_tree_id =
+                git2_to_gix_object_id(repo.find_real_tree(&branch_head, Default::default())?.id());
+
+            let mut merge = gix_repo.merge_trees(
+                merge_tree_id,
+                workspace_tree_id,
+                branch_tree_id,
+                gix_repo.default_merge_labels(),
+                merge_options_fail_fast.clone(),
+            )?;
 
-            if !index.has_conflicts() {
-                workspace_tree = repo.find_tree(index.write_tree_to(repo)?)?;
+            if !merge.has_unresolved_conflicts(conflict_kind) {
+                workspace_tree_id = merge.tree.write()?.detach();
             } else {
                 // This branch should have already been unapplied during the "update" command but for some reason that failed
                 tracing::warn!("Merge conflict between base and {:?}", branch.name);
                 branch.in_workspace = false;
                 vb_state.set_branch(branch.clone())?;
             }
         }
+        workspace_tree = repo.find_tree(gix_to_git2_oid(workspace_tree_id))?;
     }
 
     let committer = gitbutler_repo::signature(SignaturePurpose::Committer)?;

crates/gitbutler-branch-actions/src/stack.rs

@@ -7,7 +7,6 @@ use gitbutler_oplog::entry::{OperationKind, SnapshotDetails};
 use gitbutler_oplog::{OplogExt, SnapshotExt};
 use gitbutler_project::Project;
 use gitbutler_reference::normalize_branch_name;
-use gitbutler_repo::GixRepositoryExt;
 use gitbutler_repo_actions::RepoActionsExt;
 use gitbutler_stack::{
     CommitOrChangeId, ForgeIdentifier, PatchReference, PatchReferenceUpdate, Series,
@@ -192,10 +191,7 @@ pub fn push_stack(project: &Project, branch_id: StackId, with_force: bool) -> Re
 
     // First fetch, because we dont want to push integrated series
     ctx.fetch(&default_target.push_remote_name(), None)?;
-    let gix_repo = ctx
-        .gix_repository()?
-        .for_tree_diffing()?
-        .with_object_memory();
+    let gix_repo = ctx.gix_repository_for_merging_non_persisting()?;
     let cache = gix_repo.commit_graph_if_enabled()?;
     let mut graph = gix_repo.revision_graph(cache.as_ref());
     let mut check_commit = IsCommitIntegrated::new(ctx, &default_target, &gix_repo, &mut graph)?;