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There's plenty of ways to make the tool fail, and I think the scanpy singatures have changed. It might be best to rewrite the tool without the config file so that we get a chance to detect when a functions' signature changes.
NameError: name 'adata' is not defined
(3 additional frame(s) were not displayed)
...
File "galaxy/tools/evaluation.py", line 814, in __write_workdir_file
value = fill_template(content, context=context, python_template_version=self.tool.python_template_version)
File "galaxy/util/template.py", line 143, in fill_template
raise first_exception or e
File "galaxy/util/template.py", line 87, in fill_template
return unicodify(t, log_exception=False)
File "galaxy/util/__init__.py", line 1183, in unicodify
value = str(value)
File "cheetah_DynamicallyCompiledCheetahTemplate_1725304488_439239_57110.py", line 594, in respond
ToolTemplatingException: Error occurred while building config files for tool 'toolshed.g2.bx.psu.edu/repos/iuc/scanpy_plot/scanpy_plot/1.9.6+galaxy4'
File "galaxy/jobs/runners/__init__.py", line 297, in prepare_job
job_wrapper.prepare()
File "galaxy/jobs/__init__.py", line 1260, in prepare
) = tool_evaluator.build()
File "galaxy/tools/evaluation.py", line 604, in build
global_tool_logs(
File "galaxy/tools/evaluation.py", line 111, in global_tool_logs
raise ToolTemplatingException(
(60233109) Failure preparing job
The text was updated successfully, but these errors were encountered:
There's plenty of ways to make the tool fail, and I think the scanpy singatures have changed. It might be best to rewrite the tool without the config file so that we get a chance to detect when a functions' signature changes.
Sentry Issue: GALAXY-MAIN-ZWK
The text was updated successfully, but these errors were encountered: