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diff --git a/docs/jquery.sticky-kit.min.js b/docs/jquery.sticky-kit.min.js
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+/*
+ Sticky-kit v1.1.2 | WTFPL | Leaf Corcoran 2015 | http://leafo.net
+*/
+(function(){var b,f;b=this.jQuery||window.jQuery;f=b(window);b.fn.stick_in_parent=function(d){var A,w,J,n,B,K,p,q,k,E,t;null==d&&(d={});t=d.sticky_class;B=d.inner_scrolling;E=d.recalc_every;k=d.parent;q=d.offset_top;p=d.spacer;w=d.bottoming;null==q&&(q=0);null==k&&(k=void 0);null==B&&(B=!0);null==t&&(t="is_stuck");A=b(document);null==w&&(w=!0);J=function(a,d,n,C,F,u,r,G){var v,H,m,D,I,c,g,x,y,z,h,l;if(!a.data("sticky_kit")){a.data("sticky_kit",!0);I=A.height();g=a.parent();null!=k&&(g=g.closest(k));
+if(!g.length)throw"failed to find stick parent";v=m=!1;(h=null!=p?p&&a.closest(p):b(""))&&h.css("position",a.css("position"));x=function(){var c,f,e;if(!G&&(I=A.height(),c=parseInt(g.css("border-top-width"),10),f=parseInt(g.css("padding-top"),10),d=parseInt(g.css("padding-bottom"),10),n=g.offset().top+c+f,C=g.height(),m&&(v=m=!1,null==p&&(a.insertAfter(h),h.detach()),a.css({position:"",top:"",width:"",bottom:""}).removeClass(t),e=!0),F=a.offset().top-(parseInt(a.css("margin-top"),10)||0)-q,
+u=a.outerHeight(!0),r=a.css("float"),h&&h.css({width:a.outerWidth(!0),height:u,display:a.css("display"),"vertical-align":a.css("vertical-align"),"float":r}),e))return l()};x();if(u!==C)return D=void 0,c=q,z=E,l=function(){var b,l,e,k;if(!G&&(e=!1,null!=z&&(--z,0>=z&&(z=E,x(),e=!0)),e||A.height()===I||x(),e=f.scrollTop(),null!=D&&(l=e-D),D=e,m?(w&&(k=e+u+c>C+n,v&&!k&&(v=!1,a.css({position:"fixed",bottom:"",top:c}).trigger("sticky_kit:unbottom"))),e
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++Overview
+fgeo installs and loads multiple R packages of ForestGEO in a single step. Together, all packages in fgeo provide a wide renge of tools to analyse forest dynamics.
+ +
+
++Installation
+# To install from a private repo, see auth_token at https://goo.gl/re1LFe
+# install.packages("remotes")
+remotes::install_github("forestgeo/fgeo")
+
+
+
+
+
++Usage
+library(fgeo) will load the core fgeo packages.
library(fgeo)
+#> -- Attaching packages --------------------------------------------------- fgeo 0.0.0.9000 --
+#> v forestr 0.0.0.9000 v bciex 0.0.0.9000
+#> v map 0.0.0.9007 v fgeo.demography 0.0.0.9000
+#> You can see conflicts with other packages with fgeo_conflicts().
library(ctfs)
+#>
+#> Attaching package: 'ctfs'
+#> The following objects are masked from 'package:fgeo.demography':
+#>
+#> growth, mortality, recruitment
+#> The following object is masked from 'package:forestr':
+#>
+#> abundance
+
+fgeo_conflicts()
+#> -- Conflicts ----------------------------------------------------------- fgeo_conflicts() --
+#> x ctfs::abundance() masks forestr::abundance()
+#> x ctfs::growth() masks fgeo.demography::growth()
+#> x ctfs::mortality() masks fgeo.demography::mortality()
+#> x ctfs::recruitment() masks fgeo.demography::recruitment()fgeo installs these packages:
+fgeo_packages()
+#> [1] "bciex" "cli" "crayon" "fgeo.demography"
+#> [5] "forestr" "map" "purrr" "rstudioapi"
+#> [9] "fgeo"fgeo loads these packages:
+fgeo:::core
+#> [1] "forestr" "map" "bciex" "fgeo.demography"
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diff --git a/docs/reference/bciex.html b/docs/reference/bciex.html
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+ Estimate above-ground biomass in tropical forests.
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diff --git a/docs/reference/ctfs.html b/docs/reference/ctfs.html
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+ Example data sets from Barro Colorado Island (BCI).
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diff --git a/docs/reference/fgeo-package.html b/docs/reference/fgeo-package.html
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+ Legacy code from the CTFS-R Package.
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diff --git a/docs/reference/fgeo.demography.html b/docs/reference/fgeo.demography.html
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+ fgeo: Easily Install and Load Packages of ForestGEO
+'fgeo' installs and load multiple R packages of ForestGEO in +a single step. Each individual package is a self contained module. Together, +all the packages in 'fgeo' provide a wide renge of tools to analyse +forest dynamics. The modular structure of 'fgeo' makes it easy to add +and maintain more tools as they become available. Learn more about the +'fgeo' package at <http://forestgeo.github.io/fgeo>; and learn +more about ForestGEO at <http://www.forestgeo.si.edu/>.
+ + + +See also
+ +Useful links:
+ + +
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diff --git a/docs/reference/fgeo_conflicts.html b/docs/reference/fgeo_conflicts.html
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+ Recruitment, mortality and growth
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diff --git a/docs/reference/fgeo_packages.html b/docs/reference/fgeo_packages.html
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+ Conflicts between the fgeo and other packages
+This function lists all the conflicts between packages in fgeo +and other packages that you have loaded.
+ + +fgeo_conflicts()
+
+
+ Examples
++fgeo_conflicts()#> -- Conflicts ----------------------------------------------- fgeo_conflicts() -- +#> x fgeo::library.dynam.unload() masks base::library.dynam.unload() +#> x fgeo::package_version() masks base::package_version() +#> x devtools_shims::system.file() masks fgeo::system.file(), base::system.file()
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diff --git a/docs/reference/forestr.html b/docs/reference/forestr.html
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+ List all packages in fgeo
+List all packages in fgeo
+ + +fgeo_packages(include_self = TRUE)+ +
Arguments
+| include_self | +Include fgeo in the list? |
+
|---|
Examples
++fgeo_packages()#> [1] "bciex" "cli" "crayon" "fgeo.demography" +#> [5] "forestr" "map" "purrr" "rstudioapi" +#> [9] "fgeo"
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diff --git a/docs/reference/index.html b/docs/reference/index.html
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+ Abundance and basal area.
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diff --git a/docs/reference/map.html b/docs/reference/map.html
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+ + Reference + version 0.0.0.9000 +
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diff --git a/docs/reference/soilkrig.html b/docs/reference/soilkrig.html
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+ Map ForestGEO's data.
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diff --git a/docs/reference/try.html b/docs/reference/try.html
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+ Krig soil data as per John et al. (2007).
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