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Updated to silam_v5_9@605474
Some changelog: - ascii2nc: Converter from ascii/grads fields to netcdf - Correcting the fractionation of smoke to size modes (AU) - Got rid of set-unset error in reading observations - Disabled few more unset-error in MPI runs to prevent deadlocks - More rigorous parsing of HYBRID_LAYER and HYBRID_LEVEL attribures from WRF - Meteo stored as layers - few outdated quantities removed - Enable multiple netcdf fire-lists - Enabled full meteo vertical (almost up to 0 Pa) - Hardtop wind diagnostics can be now enabled at any domain top pressure to allow for WRF which can have a hard top at 100 hPa. - Better mapping of CAMS VOCs - Change meteo2disp interpolation to nearest-point (more consistent rains) - Fix for race conditions in grib-grid cache - Compiled by Intel and Visual Studio project (MAS) - Self-degrading passive tracer with definable decay rate (MAS, RK) - Fixes in settling for dd (99% rh over water) - Fraction of ice introduced to dd (neutral change). If missing, ine can use dynamic_meteo_file = TEST_FIELD ice_fract SURFACE_LEVEL 0 - Bugfix pole mass outflow for backward-time simulation - Weakened the check for hybrid layers overlap (enables some WRF setups) - Graceful crash on failure to read boundares - Re-enabled test fields for multitime stack git-svn-id: https://svn.fmi.fi/svn/tie/SILAM/silam_v5_9@605474 250f1e8d-2010-0410-9efa-e22dadc992bd
1 parent af62dc1 commit 6a98a4d

34 files changed

+894
-1140
lines changed

‎build/.gitignore‎

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silam_main.*
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ascii_2_nc.*
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frp_main_v2_0.*
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Makefile.branch

‎build/makefile‎

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@@ -49,6 +49,9 @@ BOX_MAIN = box_model
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# The main program for grads-grib converter
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GRADS2GRIB_MAIN = grads_2_grib2
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# The main program for ascii-nc converter
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ASCII2NC_MAIN = ascii_2_nc
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# The main program for is4fires
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IS4FIRES_MAIN = frp_main_v2_0
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@@ -81,6 +84,11 @@ is4fires : expand config_is4fires last.revision
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mkdir -p $(OBJDIR) $(BINDIR)
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$(MAKE) -f$(BUILDDIR)/makefile.is4fires
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ascii2nc: expand config_ascii2nc last.revision
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mkdir -p $(OBJDIR) $(BINDIR)
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$(MAKE) -f$(BUILDDIR)/makefile.ascii2nc
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clean:
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rm -f $(OBJDIR)*.o $(OBJDIR)*.mod $(BINDIR)$(PROGRAM)
@@ -109,6 +117,12 @@ config_is4fires:
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rm $(BUILDDIR)/sourcelist
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@echo Config OK.
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config_ascii2nc:
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ls -1 $(SRCDIR)*.f90 > $(BUILDDIR)/sourcelist
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perl $(BUILDDIR)/config.pl $(BUILDDIR)/sourcelist $(ASCII2NC_MAIN) $(ARCH) \
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rm $(BUILDDIR)/sourcelist
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@echo Config OK.
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tags: $(SRCDIR)*.f90

‎build/makefile.ascii2nc‎

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# Build rules for modules
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include $(BUILDDIR)/$(ASCII2NC_MAIN).objects
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$(BINDIR)$(ASCII2NC_MAIN)$(ENDING) : $(COMMON_OBJS)
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$(F90C) -o $@ $(COMMON_OBJS) $(SILAM_LIBS) $(LFLAGS)
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chmod 750 $@
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@echo New $@ is ready
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cd $(BUILDDIR)
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include $(BUILDDIR)/$(ASCII2NC_MAIN).rules.$(RULES)

‎ini/netcdf_name_table.silam‎

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@@ -327,6 +327,84 @@ LIST = DEHM_BOUNDARIES
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END_LIST = DEHM_BOUNDARIES
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###################################################
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LIST = WRF_OUTPUT_HYB
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!---------------------------------
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! wrf output
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!---------------------------------
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time_label_position = instant
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title = WRF_OUTPUT_HYB
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dim = Time t Times char
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dim = west_east x XLONG *
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dim = south_north y XLAT *
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dim = bottom_top z ZNU HYBRID_LAYER_WRF
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dim = bottom_top_stag z ZNW HYBRID_LEVEL_WRF
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dim = west_east_stag x XLONG_U *
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dim = south_north_stag y XLAT_V *
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dim = soil_layers_stag z ZS HEIGHT_FROM_SURF #HACK! Only surface needed: depth=0 is the same as height=0
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gridvar = SINALPHA sin_map_rot XXX
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gridvar = COSALPHA cos_map_rot XXX
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gridvar = MAPFAC_MX dx XXX
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gridvar = MAPFAC_MY dy XXX
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gridvar = XLONG lon XXX
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gridvar = XLAT lat XXX
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gridvar = XLONG_U lon XLONG
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gridvar = XLAT_U lat XLAT
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gridvar = XLONG_V lon XLONG
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gridvar = XLAT_V lat XLAT
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gridvar = MAPFAC_UX dx MAPFAC_MX
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gridvar = MAPFAC_UY dy MAPFAC_MY
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gridvar = MAPFAC_VX dx MAPFAC_MX
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gridvar = MAPFAC_VY dy MAPFAC_MY
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! and now some cheating - claim some random fielde to be map rotations
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! for staggered grids (only dimensions taken) and force them to be overwritten
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! by interpolated map rotations of the reference grid
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gridvar = XLONG_U sin_map_rot SINALPHA
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gridvar = XLAT_U cos_map_rot COSALPHA
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gridvar = XLONG_V sin_map_rot SINALPHA
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gridvar = XLAT_V cos_map_rot COSALPHA
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var = U u XXX -1 XXX -1 -1 1 0
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var = V v XXX -1 XXX -1 -1 1 0
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! var = W omega XXX -1 XXX -1 -1 1 0
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var = T perturb_pot_temperature XXX -1 XXX -1 -1 1 0
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var = QVAPOR specific_humidity XXX -1 XXX -1 -1 1 0
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var = QCLOUD cloud_water XXX -1 XXX -1 -1 1 0
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var = QICE cloud_ice XXX -1 XXX -1 -1 1 0
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var = CLDFRA cloud_cover XXX -1 XXX -1 -1 1 0
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var = T2 temperature_2m HEIGHT_FROM_SURF 2 XXX -1 -1 1 0
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var = Q2 specific_humidity_2m HEIGHT_FROM_SURF 2 XXX -1 -1 1 0
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var = U10 u_10m HEIGHT_FROM_SURF 10 XXX -1 -1 1 0
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var = V10 v_10m HEIGHT_FROM_SURF 10 XXX -1 -1 1 0
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var = CLDCVR total_cloud_cover SURFACE_LEVEL -1 XXX -1 -1 1 0
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var = PSFC ground_pressure SURFACE_LEVEL -1 XXX -1 -1 1 0
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var = RAINC convective_accum_rain SURFACE_LEVEL -1 XXX -1 -1 1 0
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var = RAINNC large_scale_accum_rain SURFACE_LEVEL -1 XXX -1 -1 1 0
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var = LANDMASK fraction_of_land SURFACE_LEVEL -1 XXX -1 -1 1 0 !(LAND MASK (1 FOR LAND, 0 FOR WATER)
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var = XLAND fraction_of_land SURFACE_LEVEL -1 XXX -1 -1 -1 2 !LAND MASK (1 FOR LAND, 2 FOR WATER)
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var = HGT relief_height SURFACE_LEVEL -1 XXX -1 -1 1 0
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var = SST water_surface_temp SURFACE_LEVEL -1 XXX -1 -1 1 0
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var = PBLH nwp_abl_height_m SURFACE_LEVEL -1 XXX -1 -1 1 0
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var = HFX nwp_sensible_heatflux SURFACE_LEVEL -1 XXX -1 -1 1 0
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var = LH nwp_latent_heatflux SURFACE_LEVEL -1 XXX -1 -1 1 0
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var = LAI lai SURFACE_LEVEL -1 XXX -1 -1 1 0
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### var = GLW surf_sw_down_radiation SURFACE_LEVEL -1 XXX -1 -1 1 0 !! Was enabled for for some reason
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var = SWDOWN surf_sw_down_radiation SURFACE_LEVEL -1 XXX -1 -1 1 0 !! Actual SWDOWN, Thnaks, Ramiro
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var = ALBEDO albedo SURFACE_LEVEL -1 XXX -1 -1 1 0
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var = CLDCVR total_cloud_cover SURFACE_LEVEL -1 XXX -1 -1 1 0
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var = ACSNOW weq_snow_depth SURFACE_LEVEL -1 XXX -1 -1 1e-3 0
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var = SNOW weq_snow_depth SURFACE_LEVEL -1 XXX -1 -1 1e-3 0
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var = SMOIS soil_moisture_content SURFACE_LEVEL -1 XXX -1 -1 1 0
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var = AFWA_CAPE cape SURFACE_LEVEL -1 XXX -1 -1 1 0
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END_LIST = WRF_OUTPUT_HYB
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###################################################
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LIST = WRF_OUTPUT
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@@ -799,7 +877,9 @@ var = hno3 volume_mixing_ratio XXX -1 HNO3 -1 -1 0.4598 0
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var = pan volume_mixing_ratio XXX -1 PAN -1 -1 0.2394 0
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var = ch4 volume_mixing_ratio XXX -1 CH4 -1 -1 1.8106 0
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var = n2o5 volume_mixing_ratio XXX -1 N2O5 -1 -1 0.26852 0
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var = c2h6 volume_mixing_ratio XXX -1 C2H6 -1 -1 0.9657 0
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var = c2h6 volume_mixing_ratio XXX -1 ETHA -1 -1 0.9657 0
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var = c2h4 volume_mixing_ratio XXX -1 ETH -1 -1 1.035 0
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var = c3h8 volume_mixing_ratio XXX -1 C3H8 -1 -1 1.035 0
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var = c5h8 volume_mixing_ratio XXX -1 C5H8 -1 -1 0.4260 0
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var = so2 volume_mixing_ratio XXX -1 SO2 -1 -1 0.4527 0
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‎ini/standard_auxillary_cocktails.ini‎

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component_fraction = passive 1.
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END_COCKTAIL_DESCRIPTION
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COCKTAIL_DESCRIPTION_V3_2
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cocktail_name = PASSIVE_AEROSOL_COCKTAIL
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mass_unit = kg
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gas_phase = YES
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component_fraction = passive 1. 1. 1. ! Component name and its mass fraction
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# component_fraction = passive 1. ! Component name and its mass fraction
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# component_fraction = passive 1. ! Component name and its mass fraction
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aerosol_mode = 1 0.1 1.0 0.3 mkm 1000 kg/m3
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aerosol_mode = 2 1.0 2.5 1.5 mkm 1000 kg/m3
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mode_distribution_type = FIXED_DIAMETER
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END_COCKTAIL_DESCRIPTION
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COCKTAIL_DESCRIPTION_V3_2
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cocktail_name = TIME_COCKTAIL
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mass_unit = kg

‎silam_v5_9/_how_to_compile.txt‎

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In order to compile multi-language, use /iface:cref, either in additional
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options for the Fortran command line tab, or
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Fortran -> External procedures -> Calling Convention -> C, REFERENCE
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The basic idea is that all external libraries must be in C convention,
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with lower case and no underscores. Then all goes nice and fluffy. This
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applies also to LAPACK et al, which are FORTRAN codes. They also should be
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set into C convention. A mixture is a way to trouble, although can be tried
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using BIND(C,name="....") if one is brave enough.

‎silam_v5_9/silam.ini‎

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#control_file = d:\model\silam_toypoint\toypoint_mpi.control
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control_file = d:\project\pollen\reanal_2018\ini\DA_iter_birch.ctrl
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#control_file = d:\project\pollen\reanal_2018\ini\DA_iter_birch.ctrl
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control_file = d:\model\silam_v5_9\ini\tst_passive_self_decay.ctrl
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‎silam_v5_9/silam_v5_9.sln‎

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Microsoft Visual Studio Solution File, Format Version 12.00
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# Visual Studio Version 16
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VisualStudioVersion = 16.0.30611.23
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# Visual Studio Version 17
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VisualStudioVersion = 17.7.34031.279
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MinimumVisualStudioVersion = 10.0.40219.1
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Project("{6989167D-11E4-40FE-8C1A-2192A86A7E90}") = "silam_v5_9", "silam_v5_9.vfproj", "{B4E65FC4-4B53-4F64-B3D8-98E8746D54E6}"
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EndProject
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Project("{6989167D-11E4-40FE-8C1A-2192A86A7E90}") = "kind_of", "..\kind_of\kind_of.vfproj", "{4D2726C8-13C5-4D01-AE46-73D309AEF12B}"
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EndProject
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Project("{8BC9CEB8-8B4A-11D0-8D11-00A0C91BC942}") = "kind_of_StaticLib", "..\kind_of_StaticLib\kind_of_StaticLib.vcxproj", "{F6DBE87C-1D7B-4040-829D-2BE38E9B9549}"
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EndProject
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Global
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GlobalSection(SolutionConfigurationPlatforms) = preSolution
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debug_try|Any CPU = debug_try|Any CPU
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{B4E65FC4-4B53-4F64-B3D8-98E8746D54E6}.Release|x64.Build.0 = Release|x64
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{B4E65FC4-4B53-4F64-B3D8-98E8746D54E6}.Release|x86.ActiveCfg = Release|Win32
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{B4E65FC4-4B53-4F64-B3D8-98E8746D54E6}.Release|x86.Build.0 = Release|Win32
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{4D2726C8-13C5-4D01-AE46-73D309AEF12B}.debug_try|Any CPU.ActiveCfg = debug_try|Win32
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{4D2726C8-13C5-4D01-AE46-73D309AEF12B}.debug_try|Win32.ActiveCfg = debug_try|Win32
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{4D2726C8-13C5-4D01-AE46-73D309AEF12B}.debug_try|Win32.Build.0 = debug_try|Win32
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{4D2726C8-13C5-4D01-AE46-73D309AEF12B}.debug_try|x64.ActiveCfg = debug_try|x64
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{4D2726C8-13C5-4D01-AE46-73D309AEF12B}.debug_try|x64.Build.0 = debug_try|x64
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{4D2726C8-13C5-4D01-AE46-73D309AEF12B}.debug_try|x86.ActiveCfg = debug_try|Win32
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{4D2726C8-13C5-4D01-AE46-73D309AEF12B}.debug_try|x86.Build.0 = debug_try|Win32
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{4D2726C8-13C5-4D01-AE46-73D309AEF12B}.Debug|x64.ActiveCfg = Debug|x64
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{F6DBE87C-1D7B-4040-829D-2BE38E9B9549}.Release|Win32.ActiveCfg = Release|Win32
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{F6DBE87C-1D7B-4040-829D-2BE38E9B9549}.Release|Win32.Build.0 = Release|Win32
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{F6DBE87C-1D7B-4040-829D-2BE38E9B9549}.Release|x64.ActiveCfg = Release|x64
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{F6DBE87C-1D7B-4040-829D-2BE38E9B9549}.Release|x64.Build.0 = Release|x64
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{F6DBE87C-1D7B-4040-829D-2BE38E9B9549}.Release|x86.ActiveCfg = Release|Win32
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{F6DBE87C-1D7B-4040-829D-2BE38E9B9549}.Release|x86.Build.0 = Release|Win32
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EndGlobalSection
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GlobalSection(SolutionProperties) = preSolution
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HideSolutionNode = FALSE

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