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index.html
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<!DOCTYPE html>
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<meta charset="utf-8" />
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<meta name="generator" content="pandoc" />
<title>Rmarkdown intro</title>
<script src="site_libs/jquery-1.11.3/jquery.min.js"></script>
<meta name="viewport" content="width=device-width, initial-scale=1" />
<link href="site_libs/bootstrap-3.3.5/css/bootstrap.min.css" rel="stylesheet" />
<script src="site_libs/bootstrap-3.3.5/js/bootstrap.min.js"></script>
<script src="site_libs/bootstrap-3.3.5/shim/html5shiv.min.js"></script>
<script src="site_libs/bootstrap-3.3.5/shim/respond.min.js"></script>
<script src="site_libs/navigation-1.1/tabsets.js"></script>
<link href="site_libs/highlightjs-9.12.0/default.css" rel="stylesheet" />
<script src="site_libs/highlightjs-9.12.0/highlight.js"></script>
<style type="text/css">code{white-space: pre;}</style>
<style type="text/css">
pre:not([class]) {
background-color: white;
}
</style>
<script type="text/javascript">
if (window.hljs) {
hljs.configure({languages: []});
hljs.initHighlightingOnLoad();
if (document.readyState && document.readyState === "complete") {
window.setTimeout(function() { hljs.initHighlighting(); }, 0);
}
}
</script>
<style type="text/css">
h1 {
font-size: 34px;
}
h1.title {
font-size: 38px;
}
h2 {
font-size: 30px;
}
h3 {
font-size: 24px;
}
h4 {
font-size: 18px;
}
h5 {
font-size: 16px;
}
h6 {
font-size: 12px;
}
.table th:not([align]) {
text-align: left;
}
</style>
</head>
<body>
<style type = "text/css">
.main-container {
max-width: 940px;
margin-left: auto;
margin-right: auto;
}
code {
color: inherit;
background-color: rgba(0, 0, 0, 0.04);
}
img {
max-width:100%;
height: auto;
}
.tabbed-pane {
padding-top: 12px;
}
button.code-folding-btn:focus {
outline: none;
}
</style>
<style type="text/css">
/* padding for bootstrap navbar */
body {
padding-top: 51px;
padding-bottom: 40px;
}
/* offset scroll position for anchor links (for fixed navbar) */
.section h1 {
padding-top: 56px;
margin-top: -56px;
}
.section h2 {
padding-top: 56px;
margin-top: -56px;
}
.section h3 {
padding-top: 56px;
margin-top: -56px;
}
.section h4 {
padding-top: 56px;
margin-top: -56px;
}
.section h5 {
padding-top: 56px;
margin-top: -56px;
}
.section h6 {
padding-top: 56px;
margin-top: -56px;
}
</style>
<script>
// manage active state of menu based on current page
$(document).ready(function () {
// active menu anchor
href = window.location.pathname
href = href.substr(href.lastIndexOf('/') + 1)
if (href === "")
href = "index.html";
var menuAnchor = $('a[href="' + href + '"]');
// mark it active
menuAnchor.parent().addClass('active');
// if it's got a parent navbar menu mark it active as well
menuAnchor.closest('li.dropdown').addClass('active');
});
</script>
<div class="container-fluid main-container">
<!-- tabsets -->
<script>
$(document).ready(function () {
window.buildTabsets("TOC");
});
</script>
<!-- code folding -->
<div class="navbar navbar-default navbar-fixed-top" role="navigation">
<div class="container">
<div class="navbar-header">
<button type="button" class="navbar-toggle collapsed" data-toggle="collapse" data-target="#navbar">
<span class="icon-bar"></span>
<span class="icon-bar"></span>
<span class="icon-bar"></span>
</button>
<a class="navbar-brand" href="index.html">Rmarkdown intro</a>
</div>
<div id="navbar" class="navbar-collapse collapse">
<ul class="nav navbar-nav">
<li>
<a href="index.html">Home</a>
</li>
<li>
<a href="about.html">About</a>
</li>
</ul>
<ul class="nav navbar-nav navbar-right">
</ul>
</div><!--/.nav-collapse -->
</div><!--/.container -->
</div><!--/.navbar -->
<div class="fluid-row" id="header">
<h1 class="title toc-ignore">Rmarkdown intro</h1>
</div>
<div id="r-markdown" class="section level2">
<h2>R Markdown</h2>
<p>This is an R Markdown document. Markdown is a simple formatting syntax for authoring HTML, PDF, and MS Word documents. For more details on using R Markdown see <a href="http://rmarkdown.rstudio.com" class="uri">http://rmarkdown.rstudio.com</a>.</p>
<p>When you click the <strong>Knit</strong> button a document will be generated that includes both content as well as the output of any embedded R code chunks within the document. You can embed an R code chunk like this:</p>
<pre class="r"><code>summary(cars)</code></pre>
<pre><code>## speed dist
## Min. : 4.0 Min. : 2.00
## 1st Qu.:12.0 1st Qu.: 26.00
## Median :15.0 Median : 36.00
## Mean :15.4 Mean : 42.98
## 3rd Qu.:19.0 3rd Qu.: 56.00
## Max. :25.0 Max. :120.00</code></pre>
</div>
<div id="including-plots" class="section level2">
<h2>Including Plots</h2>
<p>You can also embed plots, for example:</p>
<div class="figure">
<img src="index_files/figure-html/pressure-1.png" alt="This is a figure." width="672" />
<p class="caption">
This is a figure.
</p>
</div>
<p>Note that the <code>echo = FALSE</code> parameter was added to the code chunk to prevent printing of the R code that generated the plot.</p>
</div>
<div id="markdown-basics" class="section level2">
<h2>Markdown Basics</h2>
<p>Markdown provides an easy way to make standard types of formatted text, like</p>
<ul>
<li><em>italics</em></li>
<li><strong>bold</strong></li>
<li><code>code</code></li>
<li><a href="rmarkdown.rstudio.com">links</a></li>
<li>etc.</li>
</ul>
<p>But did you know that you can also use R Markdown’s markdown to make</p>
<ul>
<li>Latex equations, <span class="math inline">\(E = mc^{2}\)</span></li>
</ul>
</div>
<div id="adding-links-and-figures" class="section level2">
<h2>Adding links and figures</h2>
<p>To link a web page use <code>[FINEPRINT](http://fineprint.global/)</code>, the result is <a href="http://fineprint.global/">FINEPRINT</a></p>
<p>Link a figure from the web using: <code></code>. The result is</p>
<div class="figure">
<img src="http://www.fineprint.global/wp-content/uploads/2017/10/fineprint_w_erc.png" />
</div>
<p>To link a figure in a local folder use <code></code></p>
</div>
<div id="including-references" class="section level2">
<h2>Including references</h2>
<p>First add <code>bibliography: references.bib</code> to the head. The cite using the tags in the <em>BibTex</em> file, such that</p>
<p>Acording to <span class="citation">Wieland et al. (2017)</span>…</p>
<p><span class="citation">(Bruckner et al. 2012)</span></p>
<p><span class="citation">(Wieland et al. 2017; Bruckner et al. 2012)</span></p>
<p>And add <code>## References</code> at the end of the document.</p>
</div>
<div id="creating-rmarkdown-site" class="section level2">
<h2>Creating Rmarkdown site</h2>
<p>Create a new file called <code>_site.yml</code> and add the following content</p>
<pre><code>name: "Rmarkdown intro"
output_dir: "."
navbar:
title: "Rmarkdown intro"
left:
- text: "Home"
href: index.html
- text: "About"
href: about.html</code></pre>
</div>
<div id="adding-rmarkdown-pages" class="section level2">
<h2>Adding Rmarkdown pages</h2>
<p>Create a new file called <code>about.Rmd</code> and add the following content</p>
<pre><code>---
title: "About This Website"
---
More about this website.</code></pre>
<p>And update the file <code>_site.yml</code></p>
<pre><code>name: "Rmarkdown intro"
output_dir: "."
navbar:
title: "Rmarkdown intro"
left:
- text: "Home"
href: index.html
- text: "About"
href: about.html</code></pre>
</div>
<div id="publishing-rmarkdown-page-on-github-pages" class="section level2">
<h2>Publishing Rmarkdown page on Github pages</h2>
<ol style="list-style-type: decimal">
<li>Commit and push your changes to Github</li>
<li>Got to your Github project</li>
<li>Go to settings/options</li>
<li>In GitHub Pages select and master branch</li>
</ol>
</div>
<div id="references" class="section level2 unnumbered">
<h2>References</h2>
<div id="refs" class="references">
<div id="ref-Bruckner:2012">
<p>Bruckner, Martin, Stefan Giljum, Christian Lutz, and Kirsten Svenja Wiebe. 2012. “Materials embodied in international trade–Global material extraction and consumption between 1995 and 2005.” <em>Global Environmental Change</em>.</p>
</div>
<div id="ref-Wieland:2017">
<p>Wieland, Hanspeter, Stefan Giljum, Martin Bruckner, Anne Owen, and Richard Wood. 2017. “Structural production layer decomposition: a new method to measure differences between MRIO databases for footprint assessments.” <em>Economic Systems Research</em>, 1–24. doi:<a href="https://doi.org/\url{10.1080/09535314.2017.1350831}">\url{10.1080/09535314.2017.1350831}</a>.</p>
</div>
</div>
</div>
</div>
<script>
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function bootstrapStylePandocTables() {
$('tr.header').parent('thead').parent('table').addClass('table table-condensed');
}
$(document).ready(function () {
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</script>
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<script>
(function () {
var script = document.createElement("script");
script.type = "text/javascript";
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