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src/omnipy_examples/bed.py

Lines changed: 14 additions & 4 deletions
Original file line numberDiff line numberDiff line change
@@ -1,8 +1,19 @@
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from typing import Literal
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from omnipy import (Chain2, Chain3, convert_dataset, Dataset, HttpUrlDataset, LinearFlowTemplate,
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MatchItemsModel, Model, PandasDataset, SplitToItemsModel, SplitToLinesModel,
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TableOfPydanticRecordsModel, TaskTemplate, StrDataset)
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from omnipy import (Chain2,
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Chain3,
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convert_dataset,
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Dataset,
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HttpUrlDataset,
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LinearFlowTemplate,
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MatchItemsModel,
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Model,
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PandasDataset,
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SplitToItemsModel,
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SplitToLinesModel,
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StrDataset,
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TableOfPydanticRecordsModel,
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TaskTemplate)
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from omnipy_examples.util import get_github_repo_urls
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from pydantic import BaseModel, conint, constr
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@@ -73,4 +84,3 @@ def fetch_bed_dataset(url_list: HttpUrlDataset) -> StrDataset:
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def import_bed_files_to_pandas(owner: str, repo: str, branch: str, path: str,
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file_suffix: str) -> PandasDataset:
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...
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